RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 KRT81Q14533 505 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 DPCR1Q3MIW9 517 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 CCDC14Q49A88 953 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 TYW1BQ6NUM6 668 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 RINT1Q6NUQ1 792 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 RASGRP2Q7LDG7 609 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 PRPF31Q8WWY3 499 aaKnown RBP6.77□□□□□ -1.33
NF1-215ENST00000493220 MKNK1Q9BUB5 465 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 XPO4Q9C0E2 1151 aaKnown RBP6.77□□□□□ -1.33
NF1-215ENST00000493220 RAB20Q9NX57 234 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 UBQLN1Q9UMX0 589 aaKnown RBP6.77□□□□□ -1.33
NF1-215ENST00000493220 INHAP05111 366 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 PRR29P0C7W0 189 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 MAGEA1P43355 309 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
NF1-215ENST00000493220 PDXDC1Q6P996 788 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 CEP112Q8N8E3 955 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 MRPL47Q9HD33 250 aaKnown RBP6.77□□□□□ -1.33
NF1-215ENST00000493220 KCNMB3Q9NPA1 279 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 SETD4Q9NVD3 440 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 SRRDQ9UH36 339 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 DSEQ9UL01 958 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 GUCA1BQ9UMX6 200 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 RPTORQ8N122 1335 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 IRS2Q9Y4H2 1338 aa6.77□□□□□ -1.33
NF1-215ENST00000493220 GSTTP1A0A1W2PQM5 241 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 MYMKA6NI61 221 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 P4HA2O15460 535 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 EVI5O60447 810 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 MMP3P08254 477 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 NMT1P30419 496 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 LAMTOR4Q0VGL1 99 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 TRIM50Q86XT4 487 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 GABPB2Q8TAK5 448 aaPredicted RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 RNF139Q8WU17 664 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 TSPAN18Q96SJ8 248 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 RBSNQ9H1K0 784 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 PIDD1Q9HB75 910 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 TNS1Q9HBL0 1735 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 EGFRP00533 1210 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 MCF2P10911 925 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 ODC1P11926 461 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 ALDH7A1P49419 539 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 MRPS6P82932 125 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 PRKCZQ05513 592 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 IFRD2Q12894 506 aaPredicted RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 IKBKEQ14164 716 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 GRB14Q14449 540 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 USP38Q8NB14 1042 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SPIRE2Q8WWL2 714 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SERPING1P05155 500 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 CPB1P15086 417 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 GARTP22102 1010 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 PAX3P23760 479 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SGSM1Q2NKQ1 1148 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 HAUS1Q96CS2 278 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 DEFB118Q96PH6 123 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 YME1L1Q96TA2 773 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 INTS2Q9H0H0 1204 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 CEP72Q9P209 647 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 MYO1AQ9UBC5 1043 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 RBPJLQ9UBG7 517 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SBF2Q86WG5 1849 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 DPYSL4O14531 572 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 RNF8O76064 485 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 GTF2H1P32780 548 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 CREMQ03060 361 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 TMEM119Q4V9L6 283 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SCARA5Q6ZMJ2 495 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 RSRC2Q7L4I2 434 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 CXorf38Q8TB03 319 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 IFIH1Q9BYX4 1025 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 DONSONQ9NYP3 566 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 MSRAQ9UJ68 235 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 STRIP2Q9ULQ0 834 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 MYH14Q7Z406 1995 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 A6NJR5 290 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 PSMD10O75832 226 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 TAL1P17542 331 aaPredicted RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 BEX3Q00994 111 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 ELAVL2Q12926 359 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 PTPAQ15257 358 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 ARL13BQ3SXY8 428 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SPATA2LQ8IUW3 424 aaPredicted RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 MAP7D3Q8IWC1 876 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SH3TC2Q8TF17 1288 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 UBXN4Q92575 508 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SAAL1Q96ER3 474 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 DDX27Q96GQ7 796 aaKnown RBP6.76□□□□□ -1.33
NF1-215ENST00000493220 TSNARE1Q96NA8 513 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 RUSC1Q9BVN2 902 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 PGAP2Q9UHJ9 254 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 SCINQ9Y6U3 715 aa6.76□□□□□ -1.33
NF1-215ENST00000493220 ACTN4O43707 911 aaKnown RBP6.75□□□□□ -1.33
NF1-215ENST00000493220 UPP2O95045 317 aa6.75□□□□□ -1.33
NF1-215ENST00000493220 MYZAPP0CAP1 466 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms