RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 PRMT7Q9NVM4 692 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 GIT1Q9Y2X7 761 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 FNDC1Q4ZHG4 1894 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 LRRIQ4A6NIV6 560 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 DDHD2O94830 711 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 GJB2P29033 226 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 NAMPTP43490 491 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 SLC11A1P49279 550 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ECM1Q16610 540 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 TMEM31Q5JXX7 168 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 SLC27A1Q6PCB7 646 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 TMEM173Q86WV6 379 aaPredicted RBP12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 SUSD6Q92537 303 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 CASP10Q92851 521 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ZBP1Q9H171 429 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 S1PR5Q9H228 398 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 DNAJB4Q9UDY4 337 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 DNM3Q9UQ16 869 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.72□□□□□ -0.37
LRTM1-202ENST00000493075 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ZMYM2Q9UBW7 1377 aa12.72□□□□□ -0.37
LRTM1-202ENST00000493075 ARL5CA6NH57 179 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 H3BQV1 296 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 NRP1O14786 923 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 CLASP2O75122 1294 aaKnown RBP12.71□□□□□ -0.37
LRTM1-202ENST00000493075 AFF1P51825 1210 aaKnown RBP12.71□□□□□ -0.37
LRTM1-202ENST00000493075 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
LRTM1-202ENST00000493075 IL17AQ16552 155 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 KRT79Q5XKE5 535 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 MCTP1Q6DN14 999 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 KIFAP3Q92845 792 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 GAD1Q99259 594 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
LRTM1-202ENST00000493075 USP15Q9Y4E8 981 aaPredicted RBP12.71□□□□□ -0.37
LRTM1-202ENST00000493075 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 ACKR2O00590 384 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 B4GALT5O43286 388 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 DCXO43602 365 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 B4GALT3O60512 393 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 NR1I2O75469 434 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 POMCP01189 267 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 COL9A1P20849 921 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 EFNA5P52803 228 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 ATP2C1P98194 919 aaPredicted RBP12.7□□□□□ -0.38
LRTM1-202ENST00000493075 DSC1Q08554 894 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 CBX2Q14781 532 aaPredicted RBP12.7□□□□□ -0.38
LRTM1-202ENST00000493075 MAPK6Q16659 721 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 ARL6IP4Q66PJ3 421 aaKnown RBP12.7□□□□□ -0.38
LRTM1-202ENST00000493075 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 DEPTORQ8TB45 409 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 BCL7CQ8WUZ0 217 aaPredicted RBP12.7□□□□□ -0.38
LRTM1-202ENST00000493075 BSNDQ8WZ55 320 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 PHF7Q9BWX1 381 aaPredicted RBP12.7□□□□□ -0.38
LRTM1-202ENST00000493075 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
LRTM1-202ENST00000493075 MIOSQ9NXC5 875 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 HES2Q9Y543 173 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 HCFC2Q9Y5Z7 792 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
LRTM1-202ENST00000493075 MYO7AQ13402 2215 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 N4BP3O15049 544 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 LILRB3O75022 631 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 NPTXRO95502 500 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 EFEMP2O95967 443 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 MLH1P40692 756 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 ITIH3Q06033 890 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
LRTM1-202ENST00000493075 HYIQ5T013 277 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
LRTM1-202ENST00000493075 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 GSTCDQ8NEC7 633 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 VN1R3Q9BXE9 311 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
LRTM1-202ENST00000493075 C11orf16Q9NQ32 467 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 KIAA1671Q9BY89 1806 aa12.69□□□□□ -0.38
LRTM1-202ENST00000493075 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
LRTM1-202ENST00000493075 SLC26A4O43511 780 aa12.68□□□□□ -0.38
LRTM1-202ENST00000493075 SOD2P04179 222 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms