RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 SMG8Q8ND04 991 aaKnown RBP17.06■□□□□ 0.32
MRPL55-231ENST00000492170 PRSS33Q8NF86 280 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 HSD17B14Q9BPX1 270 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 SFXN1Q9H9B4 322 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 SORCS3Q9UPU3 1222 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 IPPQ9Y573 584 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
MRPL55-231ENST00000492170 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 NRP1O14786 923 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
MRPL55-231ENST00000492170 URODP06132 367 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 KLRC2P26717 231 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 TXKP42681 527 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 POU5F1BQ06416 359 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 CAPSQ13938 189 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 IER5LQ5T953 404 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 CPB2Q96IY4 423 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 EIF2AQ9BY44 585 aaKnown RBP17.05■□□□□ 0.32
MRPL55-231ENST00000492170 TRIM6Q9C030 488 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-231ENST00000492170 CSRNP2Q9H175 543 aa17.05■□□□□ 0.32
MRPL55-231ENST00000492170 MRPL17Q9NRX2 175 aaKnown RBP17.05■□□□□ 0.32
MRPL55-231ENST00000492170 PRG3Q9Y2Y8 225 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-231ENST00000492170 INPPL1O15357 1258 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 JAK2O60674 1132 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 SOD2P04179 222 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 ARL2P36404 184 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 MLH1P40692 756 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 RARRES1P49788 294 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 NEK4P51957 841 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 MBTD1Q05BQ5 628 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 TMC5Q6UXY8 1006 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 ASAP3Q8TDY4 903 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 KLHL5Q96PQ7 755 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 GAD1Q99259 594 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 HERC2P3Q9BVR0 1158 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 USTQ9Y2C2 406 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 SSX2IPQ9Y2D8 614 aa17.04■□□□□ 0.32
MRPL55-231ENST00000492170 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 WNT7AO00755 349 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 NR1I2O75469 434 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 CNPP09543 421 aaKnown RBP17.03■□□□□ 0.32
MRPL55-231ENST00000492170 GLRA2P23416 452 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 OR1G1P47890 313 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 CLCN4P51793 760 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 VCPP55072 806 aaKnown RBP17.03■□□□□ 0.32
MRPL55-231ENST00000492170 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 CCDC149Q6ZUS6 474 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 COLGALT2Q8IYK4 626 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 ZDHHC14Q8IZN3 488 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 MTMR9Q96QG7 549 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 APOL6Q9BWW8 343 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 POLR3FQ9H1D9 316 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-231ENST00000492170 MARCH5Q9NX47 278 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 GIT1Q9Y2X7 761 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 HES2Q9Y543 173 aa17.03■□□□□ 0.32
MRPL55-231ENST00000492170 POTEMA6NI47 508 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 C2CD2LO14523 706 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
MRPL55-231ENST00000492170 LILRB3O75022 631 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 BRD1O95696 1058 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 ADH1AP07327 375 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 ARF4P18085 180 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-231ENST00000492170 SCNN1GP51170 649 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 DSC1Q08554 894 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
MRPL55-231ENST00000492170 AMHR2Q16671 573 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 ELMSAN1Q6PJG2 1045 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 GPR149Q86SP6 731 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 PIGOQ8TEQ8 1089 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 ACSF2Q96CM8 615 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-231ENST00000492170 RPS6KC1Q96S38 1066 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
MRPL55-231ENST00000492170 NXF3Q9H4D5 531 aaKnown RBP17.02■□□□□ 0.32
MRPL55-231ENST00000492170 KMT2EQ8IZD2 1858 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 LRRIQ4A6NIV6 560 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 ASGR2P07307 311 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 XRCC6P12956 609 aaKnown RBP eCLIP17.01■□□□□ 0.31
MRPL55-231ENST00000492170 AVPR2P30518 371 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 MCM7P33993 719 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 GLUD2P49448 558 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 SLC27A1Q6PCB7 646 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 ZFP42Q96MM3 310 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 TMEM60Q9H2L4 133 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 TUFT1Q9NNX1 390 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 LIMD1Q9UGP4 676 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 DPP7Q9UHL4 492 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 ZMYM2Q9UBW7 1377 aa17.01■□□□□ 0.31
MRPL55-231ENST00000492170 B4GALT5O43286 388 aa17■□□□□ 0.31
MRPL55-231ENST00000492170 NPTXRO95502 500 aa17■□□□□ 0.31
MRPL55-231ENST00000492170 PDGFBP01127 241 aaPredicted RBP17■□□□□ 0.31
MRPL55-231ENST00000492170 ATP2B1P20020 1258 aa17■□□□□ 0.31
MRPL55-231ENST00000492170 TCF15Q12870 199 aa17■□□□□ 0.31
MRPL55-231ENST00000492170 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
MRPL55-231ENST00000492170 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
MRPL55-231ENST00000492170 MCPH1Q8NEM0 835 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms