RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TRIM29Q14134 588 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 BMS1Q14692 1282 aaKnown RBP9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 LONRF3Q496Y0 759 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 C8orf34Q49A92 452 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 KIAA0319Q5VV43 1072 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 URGCPQ8TCY9 931 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 PIGOQ8TEQ8 1089 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 ZSCAN31Q96LW9 406 aaPredicted RBP9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 EIF2AQ9BY44 585 aaKnown RBP9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 RHOBTB2Q9BYZ6 727 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 CHST7Q9NS84 486 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 MARCH5Q9NX47 278 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 MIOSQ9NXC5 875 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 DOCK8Q8NF50 2099 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 TRIP11Q15643 1979 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 C2orf16Q68DN1 1984 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 A0A087WWV3 80 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 NRP1O14786 923 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 ERLIN2O94905 339 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 CNPP09543 421 aaKnown RBP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 ITGA4P13612 1032 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 CYP11B2P19099 503 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 MCM7P33993 719 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 TOB1P50616 345 aaPredicted RBP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 CLCN4P51793 760 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 HMGN5P82970 282 aaKnown RBP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 RNASELQ05823 741 aaKnown RBP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 PDIA5Q14554 519 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 SAFBQ15424 915 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 LLGL2Q6P1M3 1020 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 PPFIBP1Q86W92 1011 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 NOSTRINQ8IVI9 506 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 MCPH1Q8NEM0 835 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 C8orf76Q96K31 380 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 RPGRIP1Q96KN7 1286 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 MFSD14AQ96MC6 490 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 KLHL5Q96PQ7 755 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 GAD1Q99259 594 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 CCDC113Q9H0I3 377 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 RXFP1Q9HBX9 757 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 SH2B1Q9NRF2 756 aaPredicted RBP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 DZANK1Q9NVP4 752 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 USTQ9Y2C2 406 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 INPP5FQ9Y2H2 1132 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 FAN1Q9Y2M0 1017 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 GIT1Q9Y2X7 761 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 KMT2EQ8IZD2 1858 aa9.3□□□□□ -0.92
SMARCB1-207ENST00000491967 WDFY4Q6ZS81 3184 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 TMEM221A6NGB7 291 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 M0R296 226 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 B4GALT5O43286 388 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 POMCP01189 267 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 SOD2P04179 222 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 OR52Z1P0C646 297 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 EPCAMP16422 314 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 MTHFRP42898 656 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 DSG1Q02413 1049 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 SIGLEC14Q08ET2 396 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 NCBP1Q09161 790 aaKnown RBP9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 ZNF174Q15697 407 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 PTPN21Q16825 1174 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 KIAA1841Q6NSI8 718 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 CES5AQ6NT32 575 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 SLC27A1Q6PCB7 646 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 TAS1R1Q7RTX1 841 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 GPR149Q86SP6 731 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 ZDHHC14Q8IZN3 488 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 IGSF22Q8N9C0 903 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 CMASQ8NFW8 434 aaPredicted RBP9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 AUTS2Q8WXX7 1259 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 BSNDQ8WZ55 320 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 CPB2Q96IY4 423 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 RPS6KC1Q96S38 1066 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 POLR3FQ9H1D9 316 aaPredicted RBP9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 POMKQ9H5K3 350 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 GPRC5CQ9NQ84 441 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 CDH22Q9UJ99 828 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 HES2Q9Y543 173 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 PLXNA3P51805 1871 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 DOCK6Q96HP0 2047 aa9.29□□□□□ -0.92
SMARCB1-207ENST00000491967 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 MLH1P40692 756 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 GUCY1B3Q02153 619 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 NAB2Q15742 525 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 ECM1Q16610 540 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 TTC38Q5R3I4 469 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 ATAT1Q5SQI0 421 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 KANK3Q6NY19 840 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 LILRA6Q6PI73 481 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms