RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 STK17AQ9UEE5 414 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 A0A087WZ62 844 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 ARHGEF35A5YM69 484 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 HIDE1A8MVS5 230 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 PLPP4Q5VZY2 271 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 ZNF410Q86VK4 478 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 SLC39A11Q8N1S5 342 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 RASSF8Q8NHQ8 419 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 MTRQ99707 1265 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 TCF25Q9BQ70 676 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 GCOM2Q9BZD3 368 aaPredicted RBP16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 XPNPEP1Q9NQW7 623 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
CDC42SE1-205ENST00000491825 MUC6Q6W4X9 2439 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 E9PMD0 336 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 DNM2P50570 870 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 SLC12A3P55017 1021 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 ZRSR1Q15695 479 aaKnown RBP16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 PADI6Q6TGC4 694 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 RNF169Q8NCN4 708 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 LRRC15Q8TF66 581 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 S1PR5Q9H228 398 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 BLOC1S4Q9NUP1 217 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 SUCLA2Q9P2R7 463 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 WDFY4Q6ZS81 3184 aa16.61■□□□□ 0.25
CDC42SE1-205ENST00000491825 A0A087WWV3 80 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 A0A1W2PQ27 194 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 A0A1W2PQ64 194 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 A0A1W2PQD8 194 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 CYP11B2P19099 503 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 CMA1P23946 247 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 PHKA2P46019 1235 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 HFE2Q6ZVN8 426 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 KSR1Q8IVT5 923 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 LARP4BQ92615 738 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 RAD54LQ92698 747 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 PHF7Q9BWX1 381 aaPredicted RBP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 IFT122Q9HBG6 1241 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 ENTPD7Q9NQZ7 604 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 FAM13BQ9NYF5 915 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 SPG21Q9NZD8 308 aa16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 PUF60Q9UHX1 559 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-205ENST00000491825 A0A087X0B3 334 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 PLA2G4BP0C869 781 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 GUCY2CP25092 1073 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 E2F4Q16254 413 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 ANKRD54Q6NXT1 300 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 SYCE2Q6PIF2 218 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 TMEM173Q86WV6 379 aaPredicted RBP16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 RHPN2Q8IUC4 686 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 EDAQ92838 391 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 PLIN2Q99541 437 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 PIN4Q9Y237 131 aaKnown RBP16.59■□□□□ 0.25
CDC42SE1-205ENST00000491825 MEIS3P2A8K0S8 358 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZNF623O75123 536 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 ARL2P36404 184 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 STAT6P42226 847 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 BCAR1P56945 870 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 KRT17Q04695 432 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 MXD4Q14582 209 aaPredicted RBP16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 RINT1Q6NUQ1 792 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 C1orf186Q6ZWK4 172 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 MRPL43Q8N983 215 aaKnown RBP16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 LPPQ93052 612 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 NLRP4Q96MN2 994 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 INO80BQ9C086 356 aaPredicted RBP16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 HPSEQ9Y251 543 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 COL4A3BPQ9Y5P4 624 aa16.58■□□□□ 0.24
CDC42SE1-205ENST00000491825 TECTAO75443 2155 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 NT5C1B-RDH14C9J2C7 533 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 ASAP2O43150 1006 aa16.57■□□□□ 0.24
CDC42SE1-205ENST00000491825 RAB27AP51159 221 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms