RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 NECTIN4Q96NY8 510 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 GAD1Q99259 594 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 LLPHQ9BRT6 129 aaKnown RBP20.41■□□□□ 0.86
SMIM4-205ENST00000491607 CSRNP2Q9H175 543 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 RNF39Q9H2S5 420 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 POMKQ9H5K3 350 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 TUFT1Q9NNX1 390 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 GPRC5CQ9NQ84 441 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 DZANK1Q9NVP4 752 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 STK39Q9UEW8 545 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 NR2E1Q9Y466 385 aa20.41■□□□□ 0.86
SMIM4-205ENST00000491607 ARL5CA6NH57 179 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 LRRIQ4A6NIV6 560 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 B4GALT5O43286 388 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 MED24O75448 989 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 SPATA31C1P0DKV0 1188 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMIM4-205ENST00000491607 ARF4P18085 180 aaPredicted RBP20.4■□□□□ 0.86
SMIM4-205ENST00000491607 OR1G1P47890 313 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 AMHR2Q16671 573 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 HACE1Q8IYU2 909 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 FAM184AQ8NB25 1140 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 PBXIP1Q96AQ6 731 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 RIPOR3Q96MK2 946 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 EMILIN2Q9BXX0 1053 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 NFKBIZQ9BYH8 718 aa20.4■□□□□ 0.86
SMIM4-205ENST00000491607 PRG3Q9Y2Y8 225 aaPredicted RBP20.4■□□□□ 0.86
SMIM4-205ENST00000491607 OR52Z1P0C646 297 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 KLRC2P26717 231 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 MTHFRP42898 656 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 SCNN1GP51170 649 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 PTPN21Q16825 1174 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 KANK3Q6NY19 840 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 POTEGQ6S5H5 508 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 CABP7Q86V35 215 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 PPFIBP1Q86W92 1011 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 CDR2LQ86X02 465 aaPredicted RBP20.39■□□□□ 0.85
SMIM4-205ENST00000491607 ERMNQ8TAM6 284 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 SLC22A17Q8WUG5 538 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 ZFP42Q96MM3 310 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 NACC1Q96RE7 527 aa20.39■□□□□ 0.85
SMIM4-205ENST00000491607 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.85
SMIM4-205ENST00000491607 NXF3Q9H4D5 531 aaKnown RBP20.39■□□□□ 0.85
SMIM4-205ENST00000491607 MRPL17Q9NRX2 175 aaKnown RBP20.39■□□□□ 0.85
SMIM4-205ENST00000491607 C2CD2LO14523 706 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 NR1I2O75469 434 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 NPTXRO95502 500 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 HMGN5P82970 282 aaKnown RBP20.38■□□□□ 0.85
SMIM4-205ENST00000491607 TTC38Q5R3I4 469 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 ATAT1Q5SQI0 421 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 SLC27A1Q6PCB7 646 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 COLGALT2Q8IYK4 626 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 MCPH1Q8NEM0 835 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 ZSCAN31Q96LW9 406 aaPredicted RBP20.38■□□□□ 0.85
SMIM4-205ENST00000491607 KLHL5Q96PQ7 755 aa20.38■□□□□ 0.85
SMIM4-205ENST00000491607 POLR3CQ9BUI4 534 aaPredicted RBP20.38■□□□□ 0.85
SMIM4-205ENST00000491607 DBR1Q9UK59 544 aaKnown RBP20.38■□□□□ 0.85
SMIM4-205ENST00000491607 C2CD4DB7Z1M9 353 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 SOD2P04179 222 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 URODP06132 367 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 CNPP09543 421 aaKnown RBP20.37■□□□□ 0.85
SMIM4-205ENST00000491607 AKAP5P24588 427 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 RBM25P49756 843 aaKnown RBP20.37■□□□□ 0.85
SMIM4-205ENST00000491607 SIGLEC14Q08ET2 396 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 ORC2Q13416 577 aaPredicted RBP20.37■□□□□ 0.85
SMIM4-205ENST00000491607 TMC5Q6UXY8 1006 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 ZBTB8OSQ8IWT0 167 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 SUGP1Q8IWZ8 645 aaKnown RBP20.37■□□□□ 0.85
SMIM4-205ENST00000491607 FBXO18Q8NFZ0 1043 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 FBXL18Q96ME1 805 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 MARCH5Q9NX47 278 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 MIOSQ9NXC5 875 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 GIT1Q9Y2X7 761 aa20.37■□□□□ 0.85
SMIM4-205ENST00000491607 INPPL1O15357 1258 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 CENPBP07199 599 aaPredicted RBP20.36■□□□□ 0.85
SMIM4-205ENST00000491607 HOXD11P31277 338 aaPredicted RBP20.36■□□□□ 0.85
SMIM4-205ENST00000491607 CLCN4P51793 760 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 TMEM132AQ24JP5 1023 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 KIAA1841Q6NSI8 718 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 BMP8AQ7Z5Y6 402 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 NOSTRINQ8IVI9 506 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 KCNH6Q9H252 994 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 SFXN1Q9H9B4 322 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 SH2B1Q9NRF2 756 aaPredicted RBP20.36■□□□□ 0.85
SMIM4-205ENST00000491607 PRMT7Q9NVM4 692 aaPredicted RBP20.36■□□□□ 0.85
SMIM4-205ENST00000491607 PARP2Q9UGN5 583 aa20.36■□□□□ 0.85
SMIM4-205ENST00000491607 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
SMIM4-205ENST00000491607 A0A1B0GUA9 196 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 ARHGEF35A5YM69 484 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 RPA1P27694 616 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 DSC1Q08554 894 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 NBR1Q14596 966 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 HAUS3Q68CZ6 603 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 TAS1R1Q7RTX1 841 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 TDRD5Q8NAT2 981 aaKnown RBP20.35■□□□□ 0.85
SMIM4-205ENST00000491607 HERC2P3Q9BVR0 1158 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 KLK14Q9P0G3 267 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 SSX2IPQ9Y2D8 614 aa20.35■□□□□ 0.85
SMIM4-205ENST00000491607 F8W810 466 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms