RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 RBL2Q08999 1139 aa23.8■■□□□ 1.4
VCPKMT-204ENST00000491402 PCBP1Q15365 356 aaKnown RBP eCLIP23.8■■□□□ 1.4
VCPKMT-204ENST00000491402 ZNF618Q5T7W0 954 aa23.8■■□□□ 1.4
VCPKMT-204ENST00000491402 ZC3H3Q8IXZ2 948 aaKnown RBP23.8■■□□□ 1.4
VCPKMT-204ENST00000491402 TRIM43Q96BQ3 446 aaPredicted RBP23.8■■□□□ 1.4
VCPKMT-204ENST00000491402 SFPQP23246 707 aaKnown RBP eCLIP23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 HSP90AA4PQ58FG1 418 aa23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 FAM26DQ5JW98 314 aa23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 ARMCX5Q6P1M9 558 aa23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 C12orf56Q8IXR9 622 aa23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 ACO2Q99798 780 aaKnown RBP23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 CBWD1Q9BRT8 395 aa23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 CEP290O15078 2479 aa23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 TNRC18O15417 2968 aaPredicted RBP23.79■■□□□ 1.4
VCPKMT-204ENST00000491402 TSPAN1O60635 241 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 RPL13P26373 211 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 ADAM9Q13443 819 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 TSHZ1Q6ZSZ6 1077 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 SLC9A9Q8IVB4 645 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 CCDC155Q8N6L0 562 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 TMEM174Q8WUU8 243 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 NOC4LQ9BVI4 516 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 PPP1R12CQ9BZL4 782 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 HIPK3Q9H422 1215 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 THAP9Q9H5L6 903 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 UMODL1Q5DID0 1318 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 TOM1L1O75674 476 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 ZNF18P17022 549 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 ARF4P18085 180 aaPredicted RBP23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 TPM4P67936 248 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 ATF7IP2Q5U623 682 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 CDKAL1Q5VV42 579 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 CATSPER4Q7RTX7 472 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 NOC3LQ8WTT2 800 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 POMGNT1Q8WZA1 660 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 ANKFY1Q9P2R3 1169 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 STYXL1Q9Y6J8 313 aa23.78■■□□□ 1.4
VCPKMT-204ENST00000491402 KIAA0355O15063 1070 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 CETN3O15182 167 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 FGFR1OPO95684 399 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 SYN1P17600 705 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 CYP2C18P33260 490 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 CYP2J2P51589 502 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 BFSP2Q13515 415 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 MYBPC2Q14324 1141 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 TMEM132AQ24JP5 1023 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 TRAF7Q6Q0C0 670 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 ZBTB45Q96K62 511 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 CEP63Q96MT8 703 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 DMAC2Q9NW81 257 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 HSPBP1Q9NZL4 362 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 PRKAG2Q9UGJ0 569 aa23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 ZMYND8Q9ULU4 1186 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 NOC2LQ9Y3T9 749 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-204ENST00000491402 PITPNM1O00562 1244 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 GARTP22102 1010 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 ITGB8P26012 769 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 SLFN12LQ6IEE8 588 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 FAM228AQ86W67 206 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 IRF2BP1Q8IU81 584 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 CPB2Q96IY4 423 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 PCIF1Q9H4Z3 704 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 PTPRHQ9HD43 1115 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 TNFSF13BQ9Y275 285 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 TANC1Q9C0D5 1861 aa23.76■■□□□ 1.39
VCPKMT-204ENST00000491402 CLDN3O15551 220 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 RAG1P15918 1043 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 PROZP22891 400 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 FBXO47Q5MNV8 452 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 HAPLN2Q9GZV7 340 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 GRPEL1Q9HAV7 217 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 AGPAT5Q9NUQ2 364 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 RBAK-RBAKDNI3L0D1 243 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 ABLIM1O14639 778 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 RPS6KA5O75582 802 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 ATP1A3P13637 1013 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 SELPP16109 830 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 HOXA11P31270 313 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 NCBP1Q09161 790 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 LRRC8DQ7L1W4 858 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 CDR2LQ86X02 465 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 TCHPQ9BT92 498 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 OSBPL7Q9BZF2 842 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 NR2E3Q9Y5X4 410 aa23.75■■□□□ 1.39
VCPKMT-204ENST00000491402 PDE4DIPQ5VU43 2346 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 A0A0B4J269 797 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 A0A1B0GUA9 196 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 EXOC3O60645 756 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 AKAP3O75969 853 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 TIMP1P01033 207 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 GHRP10912 638 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 MATR3P43243 847 aaKnown RBP eCLIP23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 CASP4P49662 377 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 CCL23P55773 120 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 UVSSAQ2YD98 709 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 EEF1DP3Q658K8 133 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 CEP135Q66GS9 1140 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 MPZL3Q6UWV2 235 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 FILIP1Q7Z7B0 1213 aa23.74■■□□□ 1.39
VCPKMT-204ENST00000491402 FAM114A1Q8IWE2 563 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms