RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	DOCK8	Q8NF50	2099 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	DDX11L8	A8MPP1	907 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	LRRN2	O75325	713 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	PRKCQ	Q04759	706 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	CSTF1	Q05048	431 aa	Known RBP	21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	SNW1	Q13573	536 aa	Known RBP	21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	MIER3	Q7Z3K6	550 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	COLGALT2	Q8IYK4	626 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	CNNM3	Q8NE01	707 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	BICD2	Q8TD16	824 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	SLC5A5	Q92911	643 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	CCDC136	Q96JN2	1154 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	OSBPL6	Q9BZF3	934 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	IFT122	Q9HBG6	1241 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	FAM217B	Q9NTX9	383 aa	Predicted RBP	21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	MARCH5	Q9NX47	278 aa		21.59	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	ADAMTS3	O15072	1205 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	TGM5	O43548	720 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	FSHR	P23945	695 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	CDC27	P30260	824 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	MAGEA9	P43362	315 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	USP11	P51784	963 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	SLC44A4	Q53GD3	710 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	GPR65	Q8IYL9	337 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	RNF168	Q8IYW5	571 aa	Predicted RBP	21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	SH2D3A	Q9BRG2	576 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	RTKN	Q9BST9	563 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	COLEC11	Q9BWP8	271 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	CHST7	Q9NS84	486 aa		21.58	■■□□□ 1.05
CDK5RAP2-218	ENST00000491334	CCDC196	A0A1B0GTZ2	297 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	FAM170B	A6NMN3	283 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	STBD1	O95210	358 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	EFEMP2	O95967	443 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ITGA4	P13612	1032 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	NCL	P19338	710 aa	Known RBP	21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	EXOSC10	Q01780	885 aa	Known RBP	21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	UBXN2B	Q14CS0	331 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	RNF20	Q5VTR2	975 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	SRGAP1	Q7Z6B7	1085 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ST13P5	Q8NFI4	369 aa	Predicted RBP	21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	RPP25	Q9BUL9	199 aa	Known RBP	21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	DDX23	Q9BUQ8	820 aa	Known RBP	21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ZSCAN32	Q9NX65	697 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	FNIP2	Q9P278	1114 aa		21.57	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	TMEM150B	A6NC51	233 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	HOXA11	P31270	313 aa	Predicted RBP	21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	RCAN1	P53805	252 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	MLF2	Q15773	248 aa	Predicted RBP	21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ST3GAL2	Q16842	350 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	LILRA6	Q6PI73	481 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	RSPO2	Q6UXX9	243 aa	Predicted RBP	21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	MTSS1L	Q765P7	747 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	DHX32	Q7L7V1	743 aa	Known RBP	21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	EXOC8	Q8IYI6	725 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ZBTB44	Q8NCP5	570 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	FGF14	Q92915	247 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	CDH7	Q9ULB5	785 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	NAP1L2	Q9ULW6	460 aa	Predicted RBP	21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	COL4A3BP	Q9Y5P4	624 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	WDR81	Q562E7	1941 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	CHD8	Q9HCK8	2581 aa		21.56	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	KLF18	A0A0U1RQI7	1052 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	DCDC2B	A2VCK2	349 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	TBC1D4	O60343	1298 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ZMYND10	O75800	440 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	PSMD10	O75832	226 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	SRGAP2C	P0DJJ0	459 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ADD1	P35611	737 aa	Known RBP	21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	PFKP	Q01813	784 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	CREM	Q03060	361 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	USP41	Q3LFD5	358 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ZBTB41	Q5SVQ8	909 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	UBXN11	Q5T124	520 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	PARM1	Q6UWI2	310 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	NELL2	Q99435	816 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	EPC1	Q9H2F5	836 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	USP18	Q9UMW8	372 aa		21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	SMG5	Q9UPR3	1016 aa	Known RBP	21.55	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ARL5C	A6NH57	179 aa		21.54	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	NCAM2	O15394	837 aa		21.54	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	DSC1	Q08554	894 aa		21.54	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	TCEANC2	Q96MN5	208 aa		21.54	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	MTF2	Q9Y483	593 aa	Predicted RBP	21.54	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	MAP1B	P46821	2468 aa	Known RBP	21.54	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	LILRB5	O75023	590 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ANO5	Q75V66	913 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	GRASP	Q7Z6J2	395 aa	Predicted RBP	21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	GLYCTK	Q8IVS8	523 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	SMG8	Q8ND04	991 aa	Known RBP	21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	PRPF31	Q8WWY3	499 aa	Known RBP	21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	SLC7A3	Q8WY07	619 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	GJA10	Q969M2	543 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	GAD1	Q99259	594 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	CHD6	Q8TD26	2715 aa		21.53	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	PRPF3	O43395	683 aa	Known RBP	21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	EDIL3	O43854	480 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	PSMC5	P62195	406 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	AKAP17A	Q02040	695 aa	Known RBP	21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	NCBP1	Q09161	790 aa	Known RBP	21.52	■■□□□ 1.04

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms