RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FOXP2O15409 715 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 NPTXRO95502 500 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 FLT3P36888 993 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 COILP38432 576 aaPredicted RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 SKIV2L2P42285 1042 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 RBM5P52756 815 aaKnown RBP eCLIP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF571Q7Z3V5 609 aaPredicted RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 TRIM74Q86UV6 250 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 TRIM73Q86UV7 250 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 SFR1Q86XK3 245 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 CRLF3Q8IUI8 442 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 NMD3Q96D46 503 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 THTPAQ9BU02 230 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 IQANK1A0A1B0GTG1 560 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ENO1P06733 434 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 GAP43P17677 238 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 MFAP3P55082 362 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ASPHQ12797 758 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 CLMNQ96JQ2 1002 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 NDNQ99608 321 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ALG13Q9NP73 1137 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC12A4Q9UP95 1085 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 NBPF26B4DH59 902 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 ENTPD5O75356 428 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 CBX6O95503 412 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 RARAP10276 462 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 NPEPPSP55786 919 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 BNIP1Q12981 228 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 BBS9Q3SYG4 887 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 DNAL1Q4LDG9 190 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 ANKRD20A4Q4UJ75 823 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 SYNE4Q8N205 404 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 RIBC1Q8N443 379 aaPredicted RBP12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 NBPF15Q8N660 670 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 KIAA0895Q8NCT3 520 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 CKAP2Q8WWK9 683 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF570Q96NI8 536 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 RBM15Q96T37 977 aaKnown RBP eCLIP12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 TSSK1BQ9BXA7 367 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 TBC1D10AQ9BXI6 508 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.48
CRNKL1-204ENST00000490910 HIC1Q14526 733 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 CCDC124Q96CT7 223 aaKnown RBP12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 TTC7AQ9ULT0 858 aaPredicted RBP12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 PHEXP78562 749 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 SYDE1Q6ZW31 735 aaPredicted RBP12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 ZNF184Q99676 751 aaPredicted RBP12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 ISCA1Q9BUE6 129 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 NUP85Q9BW27 656 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 ANLNQ9NQW6 1124 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 CACNA1FO60840 1977 aa12.02□□□□□ -0.49
CRNKL1-204ENST00000490910 A0A0A6YYK5 440 aaPredicted RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 CPA2P48052 419 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 PSMD7P51665 324 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 ITGA8P53708 1063 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 AUHQ13825 339 aaKnown RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 MTFR1Q15390 333 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 EDRF1Q3B7T1 1238 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 RNF43Q68DV7 783 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 KLC3Q6P597 504 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 LVRNQ6Q4G3 990 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 HEY2Q9UBP5 337 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 MTO1Q9Y2Z2 717 aaKnown RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 H3BRJ5 948 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 CLDN3O15551 220 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 GRM4Q14833 912 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 TRIP10Q15642 601 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 PARP6Q2NL67 630 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 BAP1Q92560 729 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 CCDC127Q96BQ5 260 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 CATSPER2Q96P56 530 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 TRIM56Q9BRZ2 755 aaKnown RBP12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 OSBPL8Q9BZF1 889 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 OSGEPQ9NPF4 335 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 SALL4Q9UJQ4 1053 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 COPEO14579 308 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 TDP2O95551 362 aa12.01□□□□□ -0.49
CRNKL1-204ENST00000490910 CYP2D6P10635 497 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms