RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 NECTIN4Q96NY8 510 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 GAD1Q99259 594 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 TMEM175Q9BSA9 504 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 CSRNP2Q9H175 543 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 RNF39Q9H2S5 420 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 POMKQ9H5K3 350 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 IRAK3Q9Y616 596 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 TDRD15B5MCY1 1934 aaKnown RBP23.28■■□□□ 1.32
SYNE4-205ENST00000490730 ARL5CA6NH57 179 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 NRP1O14786 923 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 OR1G1P47890 313 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 ZNF174Q15697 407 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 KANK3Q6NY19 840 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 CABP7Q86V35 215 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 RIPOR3Q96MK2 946 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 EMILIN2Q9BXX0 1053 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 GPRC5CQ9NQ84 441 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 STK39Q9UEW8 545 aa23.28■■□□□ 1.32
SYNE4-205ENST00000490730 WDFY4Q6ZS81 3184 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 LRRIQ4A6NIV6 560 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 C2CD2LO14523 706 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 B4GALT5O43286 388 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 ARF4P18085 180 aaPredicted RBP23.27■■□□□ 1.32
SYNE4-205ENST00000490730 KLRC2P26717 231 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 MTHFRP42898 656 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 SCNN1GP51170 649 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 POU5F1BQ06416 359 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 PTPN21Q16825 1174 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 CDR2LQ86X02 465 aaPredicted RBP23.27■■□□□ 1.32
SYNE4-205ENST00000490730 CATSPER3Q86XQ3 398 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 IFNLR1Q8IU57 520 aaPredicted RBP23.27■■□□□ 1.32
SYNE4-205ENST00000490730 HACE1Q8IYU2 909 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 ZFP42Q96MM3 310 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 NXF3Q9H4D5 531 aaKnown RBP23.27■■□□□ 1.32
SYNE4-205ENST00000490730 TUFT1Q9NNX1 390 aa23.27■■□□□ 1.32
SYNE4-205ENST00000490730 MED24O75448 989 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 NPTXRO95502 500 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 OR52Z1P0C646 297 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 SPATA31C1P0DKV0 1188 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.31
SYNE4-205ENST00000490730 HOXD11P31277 338 aaPredicted RBP23.26■■□□□ 1.31
SYNE4-205ENST00000490730 AMHR2Q16671 573 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 POTEGQ6S5H5 508 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 TMC5Q6UXY8 1006 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 PPFIBP1Q86W92 1011 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 SUGP1Q8IWZ8 645 aaKnown RBP23.26■■□□□ 1.31
SYNE4-205ENST00000490730 FAM184AQ8NB25 1140 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 ERMNQ8TAM6 284 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 SLC22A17Q8WUG5 538 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 FBXL18Q96ME1 805 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 LLPHQ9BRT6 129 aaKnown RBP23.26■■□□□ 1.31
SYNE4-205ENST00000490730 MRPL17Q9NRX2 175 aaKnown RBP23.26■■□□□ 1.31
SYNE4-205ENST00000490730 DBR1Q9UK59 544 aaKnown RBP23.26■■□□□ 1.31
SYNE4-205ENST00000490730 ZNF318Q5VUA4 2279 aa23.26■■□□□ 1.31
SYNE4-205ENST00000490730 C2CD4DB7Z1M9 353 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 URODP06132 367 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 AKAP5P24588 427 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 SIGLEC14Q08ET2 396 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 ATAT1Q5SQI0 421 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 SLC27A1Q6PCB7 646 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 COLGALT2Q8IYK4 626 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 MCPH1Q8NEM0 835 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 KLHL5Q96PQ7 755 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 NACC1Q96RE7 527 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 NFKBIZQ9BYH8 718 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 MARCH5Q9NX47 278 aa23.25■■□□□ 1.31
SYNE4-205ENST00000490730 NR1I2O75469 434 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 CNPP09543 421 aaKnown RBP23.24■■□□□ 1.31
SYNE4-205ENST00000490730 TMEM132AQ24JP5 1023 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 TTC38Q5R3I4 469 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 KIAA1841Q6NSI8 718 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 ZBTB8OSQ8IWT0 167 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 POLR3CQ9BUI4 534 aaPredicted RBP23.24■■□□□ 1.31
SYNE4-205ENST00000490730 FOXP1Q9H334 677 aaPredicted RBP23.24■■□□□ 1.31
SYNE4-205ENST00000490730 MIOSQ9NXC5 875 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 PARP2Q9UGN5 583 aa23.24■■□□□ 1.31
SYNE4-205ENST00000490730 ARHGEF35A5YM69 484 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 SOD2P04179 222 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 RBM25P49756 843 aaKnown RBP23.23■■□□□ 1.31
SYNE4-205ENST00000490730 HMGN5P82970 282 aaKnown RBP23.23■■□□□ 1.31
SYNE4-205ENST00000490730 BMP8AQ7Z5Y6 402 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 TDRD5Q8NAT2 981 aaKnown RBP23.23■■□□□ 1.31
SYNE4-205ENST00000490730 KREMEN2Q8NCW0 462 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 FBXO18Q8NFZ0 1043 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 ZSCAN31Q96LW9 406 aaPredicted RBP23.23■■□□□ 1.31
SYNE4-205ENST00000490730 HERC2P3Q9BVR0 1158 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 KCNH6Q9H252 994 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 SFXN1Q9H9B4 322 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 KLK14Q9P0G3 267 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 GIT1Q9Y2X7 761 aa23.23■■□□□ 1.31
SYNE4-205ENST00000490730 F8W810 466 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 INPPL1O15357 1258 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 LIG1P18858 919 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 CLCN4P51793 760 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 DSC1Q08554 894 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 PADI6Q6TGC4 694 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 TAS1R1Q7RTX1 841 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 NOSTRINQ8IVI9 506 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 FEZF2Q8TBJ5 459 aa23.22■■□□□ 1.31
SYNE4-205ENST00000490730 PRMT7Q9NVM4 692 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms