RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 SGK1O00141 431 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 PQBP1O60828 265 aaKnown RBP15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 CD4P01730 458 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 RSPH10BP0C881 870 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 SDC4P31431 198 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 PSMC1P62191 440 aaKnown RBP15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 EDRF1Q3B7T1 1238 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 HDXQ7Z353 690 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 ATP8B4Q8TF62 1192 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 TMEM169Q96HH4 297 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 RUSC1Q9BVN2 902 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 LTN1O94822 1766 aa15.4■□□□□ 0.06
ARHGEF39-205ENST00000490638 MCF2LO15068 1137 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 GPR182O15218 404 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 GRB10Q13322 594 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 TAOK1Q7L7X3 1001 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 RPUSD2Q8IZ73 545 aaKnown RBP15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 FBXL16Q8N461 479 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 KRT12Q99456 494 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 PYCARDQ9ULZ3 195 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 SLC8A2Q9UPR5 921 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 TTC26A0AVF1 554 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 PDGFRBP09619 1106 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 PTPAQ15257 358 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 CYP4F22Q6NT55 531 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 TATDN1Q6P1N9 297 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 ZWILCHQ9H900 591 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 PDE11AQ9HCR9 933 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 KLK14Q9P0G3 267 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 CLTAP09496 248 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 STAG3L1P0CL83 205 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 ATP5DP30049 168 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 CXCR5P32302 372 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 MAN1A1P33908 653 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 C4orf19Q8IY42 314 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 KRT222Q8N1A0 295 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 MTG1Q9BT17 334 aaPredicted RBP15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 NSRP1Q9H0G5 558 aaKnown RBP15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 DONSONQ9NYP3 566 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 CSDE1O75534 798 aaKnown RBP15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 B3GAT3O94766 335 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 MOCS3O95396 460 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 CALB1P05937 261 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 LMNB2Q03252 620 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 DGKZQ13574 1117 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 IQSEC1Q6DN90 963 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 HINFPQ9BQA5 517 aa15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 RANBP17Q9H2T7 1088 aaKnown RBP15.39■□□□□ 0.05
ARHGEF39-205ENST00000490638 FAM86B1E9PN63 330 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 FAM86B2P0C5J1 330 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 HPDP32754 393 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 SNX1Q13596 522 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 SGSM1Q2NKQ1 1148 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 CLEC17AQ6ZS10 378 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 MICALCLQ6ZW33 695 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 OSMRQ99650 979 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 PPP1R12CQ9BZL4 782 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 CCDC68Q9H2F9 335 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 PCDHB7Q9Y5E2 793 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 ATF2P15336 505 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 PRPSAP1Q14558 356 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 Q4G0T1 1027 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 SHCBP1Q8NEM2 672 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 TRIM7Q9C029 511 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 TBX20Q9UMR3 447 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 PTPN22Q9Y2R2 807 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 ALDH7A1P49419 539 aaKnown RBP15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 ELF2Q15723 593 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 SEZ6Q53EL9 994 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 CFAP157Q5JU67 520 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 LRRC31Q6UY01 552 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 CYP39A1Q9NYL5 469 aa15.38■□□□□ 0.05
ARHGEF39-205ENST00000490638 A0A087WZ62 844 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FSCN1Q16658 493 aaKnown RBP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 VSIG10LQ86VR7 867 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 SPATA2LQ8IUW3 424 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 DNAAF3Q8N9W5 541 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 HVCN1Q96D96 273 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 NCAPGQ9BPX3 1015 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 BPIFA3Q9BQP9 254 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FDXACB1Q9BRP7 624 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FNDC3AQ9Y2H6 1198 aaKnown RBP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 ABCC6O95255 1503 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 ZRANB2O95218 330 aaKnown RBP eCLIP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 NPTX2P47972 431 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FMO5P49326 533 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 GUCY2FP51841 1108 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 GPC5P78333 572 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 KRT71Q3SY84 523 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 SARM1Q6SZW1 724 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 OGTO15294 1046 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 MUTP22033 750 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 PRAMEF19Q5SWL8 479 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FAM102AQ5T9C2 384 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms