RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-210	ENST00000490099	FZD8	Q9H461	694 aa		10.81	□□□□□ -0.68
TMEM39A-210	ENST00000490099	UBN1	Q9NPG3	1134 aa		10.81	□□□□□ -0.68
TMEM39A-210	ENST00000490099	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.81	□□□□□ -0.68
TMEM39A-210	ENST00000490099	USP15	Q9Y4E8	981 aa	Predicted RBP	10.81	□□□□□ -0.68
TMEM39A-210	ENST00000490099	DCX	O43602	365 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CLASP2	O75122	1294 aa	Known RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ARF4	P18085	180 aa	Predicted RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CYP11B2	P19099	503 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	SSTR3	P32745	418 aa	Predicted RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	TEC	P42680	631 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	SLC11A1	P49279	550 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	DSC1	Q08554	894 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	SMC1A	Q14683	1233 aa	Known RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ANKRD54	Q6NXT1	300 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	NOTUM	Q6P988	496 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	TMC7	Q7Z402	723 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	RNF168	Q8IYW5	571 aa	Predicted RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	IGSF22	Q8N9C0	903 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	GSTCD	Q8NEC7	633 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	MCPH1	Q8NEM0	835 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	SLC22A17	Q8WUG5	538 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	EIF2A	Q9BY44	585 aa	Known RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ZBP1	Q9H171	429 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	RSAD1	Q9HA92	442 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	DNAJB4	Q9UDY4	337 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	DAXX	Q9UER7	740 aa	Predicted RBP	10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	IPP	Q9Y573	584 aa		10.8	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ARID2	Q68CP9	1835 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ZMYM2	Q9UBW7	1377 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	NT5C1B-RDH14	C9J2C7	533 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CSPG5	O95196	566 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CXCL14	O95715	111 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ALDH2	P05091	517 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ATP2B1	P20020	1258 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	GIT2	Q14161	759 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ECM1	Q16610	540 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	LONRF3	Q496Y0	759 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PLPP4	Q5VZY2	271 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	RNF135	Q8IUD6	432 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	COLGALT2	Q8IYK4	626 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	VPS52	Q8N1B4	723 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ERMN	Q8TAM6	284 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	TMEM169	Q96HH4	297 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PHF7	Q9BWX1	381 aa	Predicted RBP	10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	GPRC5C	Q9NQ84	441 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ENTPD7	Q9NQZ7	604 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	STK39	Q9UEW8	545 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	METRN	Q9UJH8	293 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	GIT1	Q9Y2X7	761 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	HCFC2	Q9Y5Z7	792 aa		10.79	□□□□□ -0.68
TMEM39A-210	ENST00000490099	TECTA	O75443	2155 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ARL5C	A6NH57	179 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PRR33	A8MZF0	331 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	INO80B-WBP1	J3KQ70	363 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	LAD1	O00515	517 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	B4GALT5	O43286	388 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ERLIN2	O94905	339 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CD2BP2	O95400	341 aa	Known RBP	10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	ITGA4	P13612	1032 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PRPH	P41219	470 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	NCBP1	Q09161	790 aa	Known RBP	10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PTGDR	Q13258	359 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	IL17A	Q16552	155 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	POTEG	Q6S5H5	508 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PADI6	Q6TGC4	694 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	GPR65	Q8IYL9	337 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	FAM184A	Q8NB25	1140 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	URGCP	Q8TCY9	931 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	BSND	Q8WZ55	320 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	TMX3	Q96JJ7	454 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PRIMPOL	Q96LW4	560 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	GAD1	Q99259	594 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	CCDC113	Q9H0I3	377 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	MARCH5	Q9NX47	278 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	MIOS	Q9NXC5	875 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	RAPGEFL1	Q9UHV5	662 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	INPP5F	Q9Y2H2	1132 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	PCDHB6	Q9Y5E3	794 aa		10.78	□□□□□ -0.68
TMEM39A-210	ENST00000490099	NRP1	O14786	923 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	USO1	O60763	962 aa	Known RBP	10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	PAPLN	O95428	1278 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	C1R	P00736	705 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	POMC	P01189	267 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	SRGAP2B	P0DMP2	458 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	RNASEL	Q05823	741 aa	Known RBP	10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	NBR1	Q14596	966 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	BMS1	Q14692	1282 aa	Known RBP	10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	PTPN14	Q15678	1187 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	SLC27A1	Q6PCB7	646 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	PDCD7	Q8N8D1	485 aa	Known RBP	10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	CASP10	Q92851	521 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	CPB2	Q96IY4	423 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	ZFP42	Q96MM3	310 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	ADAM7	Q9H2U9	754 aa		10.77	□□□□□ -0.69
TMEM39A-210	ENST00000490099	CHST7	Q9NS84	486 aa		10.77	□□□□□ -0.69

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