RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 RMDN3Q96TC7 470 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PDCD2LQ9BRP1 358 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SELENOOQ9BVL4 669 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ATP13A2Q9NQ11 1180 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PXMP2Q9NR77 195 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PICK1Q9NRD5 415 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 RNF146Q9NTX7 359 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 RBM12Q9NTZ6 932 aaKnown RBP10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 VPS18Q9P253 973 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 HACL1Q9UJ83 578 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 EXOC7Q9UPT5 735 aa10.38□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 J3QL48 77 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 DDX3XO00571 662 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 HOXA2O43364 376 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 TMEM253P0C7T8 217 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 DNA2P51530 1060 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 OAZ1P54368 228 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 NCKAP1LP55160 1127 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 WNT7BP56706 349 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PAK2Q13177 524 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PLS1Q14651 629 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 KIF22Q14807 665 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 DRAP1Q14919 205 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CBWD6Q4V339 395 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 XKR9Q5GH70 373 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CBWD3Q5JTY5 395 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CBWD5Q5RIA9 395 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ZNF746Q6NUN9 644 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 GSPT2Q8IYD1 628 aaKnown RBP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 XXYLT1Q8NBI6 393 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 TPCN2Q8NHX9 752 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ATG4CQ96DT6 458 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CALR3Q96L12 384 aaKnown RBP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 LRRC1Q9BTT6 524 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 IKZF4Q9H2S9 585 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SMARCAL1Q9NZC9 954 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 EHD2Q9NZN4 543 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 FAN1Q9Y2M0 1017 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MYH10P35580 1976 aa10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 COL11A1P12107 1806 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-205ENST00000489858 EMSYQ7Z589 1322 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PGRMC1O00264 195 aaKnown RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 VWA5AO00534 786 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 KCNK3O14649 394 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 BACH1O14867 736 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ZMYND10O75800 440 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 TNFAIP3P21580 790 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 VAMP7P51809 220 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 BACE1P56817 501 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 GTF2BQ00403 316 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 UGCGQ16739 394 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 TBC1D10BQ4KMP7 808 aaPredicted RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 FAM102BQ5T8I3 360 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SND1Q7KZF4 910 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MAEAQ7L5Y9 396 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PEX26Q7Z412 305 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 HAUS6Q7Z4H7 955 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 LRRC57Q8N9N7 239 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 USP38Q8NB14 1042 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ZNF280CQ8ND82 737 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CTNNBL1Q8WYA6 563 aaPredicted RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 RFFLQ8WZ73 363 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 HLA-CQ95604 372 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CAVIN3Q969G5 261 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MS4A14Q96JA4 679 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CDHR1Q96JP9 859 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SENP7Q9BQF6 1050 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MAF1Q9H063 256 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 HSPBP1Q9NZL4 362 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SUCLA2Q9P2R7 463 aaPredicted RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ZNF112Q9UJU3 913 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
RAB3GAP1-205ENST00000489858 GOLGA6BA6NDN3 693 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ERICH4A6NGS2 130 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PMM2O15305 246 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MAFGO15525 162 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 HEXIM1O94992 359 aaKnown RBP10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 CCNE2O96020 404 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MYBL2P10244 700 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ABCD1P33897 745 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 MXI1P50539 228 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SMTNP53814 917 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 GALCP54803 685 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PEX3P56589 373 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SPP2Q13103 211 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 DMP1Q13316 513 aaPredicted RBP10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 DGKZQ13574 1117 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 BAATQ14032 418 aaPredicted RBP10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 ARHGAP44Q17R89 818 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 TAF3Q5VWG9 929 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 PLA2G4FQ68DD2 849 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SNRNP48Q6IEG0 339 aaKnown RBP10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 OTUD6AQ7L8S5 288 aa10.35□□□□□ -0.75
RAB3GAP1-205ENST00000489858 SLFN11Q7Z7L1 901 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms