RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FRMD4BQ9Y2L6 1034 aa9.23□□□□□ -0.93
VTI1A-207ENST00000489357 NPHP3-ACAD11A0A0J9YXS1 232 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 WDR64B1ANS9 1081 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 H0YCG3 227 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 CES2O00748 559 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 NOL4O94818 638 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 HOXC6P09630 235 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 ARP10275 920 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 CAPN2P17655 700 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 HOXD10P28358 340 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 MAPK4P31152 587 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 EIF4A3P38919 411 aaKnown RBP9.22□□□□□ -0.93
VTI1A-207ENST00000489357 MAGEA1P43355 309 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 KLK7P49862 253 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 CASP5P51878 434 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 FCGRTP55899 365 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 RTP1P59025 263 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 PSMC5P62195 406 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 GABPB1Q06547 395 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-207ENST00000489357 CTTNQ14247 550 aaKnown RBP9.22□□□□□ -0.93
VTI1A-207ENST00000489357 KIF22Q14807 665 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 PGM5Q15124 567 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 ODR4Q5SWX8 454 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 HGSNATQ68CP4 663 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 RNF207Q6ZRF8 634 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 NLRX1Q86UT6 975 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 ABRAQ8N0Z2 381 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 SLC35C1Q96A29 364 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 EEF2KMTQ96G04 330 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 BORCS6Q96GS4 357 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 AGBL1Q96MI9 1066 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 NOX5Q96PH1 765 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 PXMP2Q9NR77 195 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 TBC1D7Q9P0N9 293 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 GABRQQ9UN88 632 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 LCTP09848 1927 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 NFASCO94856 1347 aa9.22□□□□□ -0.93
VTI1A-207ENST00000489357 MCM3APO60318 1980 aa9.21□□□□□ -0.93
VTI1A-207ENST00000489357 A0A0A6YYK5 440 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 A0A0U1RQG5 324 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 SLC15A5A6NIM6 579 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 NFIBO00712 420 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 EPHB6O15197 1021 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 TGFB1I1O43294 461 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 STRNO43815 780 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 AKAP3O75969 853 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 CLSTN1O94985 981 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 SLC25A27O95847 323 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 MYBP10242 640 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 ALAS1P13196 640 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 PLS3P13797 630 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 UCHL3P15374 230 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 FERP16591 822 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 CCND2P30279 289 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 RARRES1P49788 294 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 SOX10P56693 466 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 POLR2FP61218 127 aaKnown RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 RPS6P62753 249 aaKnown RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 CCNA1P78396 465 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 CETN1Q12798 172 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 GRB14Q14449 540 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 ASIC2Q16515 512 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 MAP9Q49MG5 647 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 TEX35Q5T0J7 233 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 KLHDC7AQ5VTJ3 777 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 INTS8Q75QN2 995 aaKnown RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 OTUD6AQ7L8S5 288 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 GPR142Q7Z601 462 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 USP37Q86T82 979 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 FAM186BQ8IYM0 893 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 NSUN6Q8TEA1 469 aaKnown RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 TBC1D5Q92609 795 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 ATP6V0A1Q93050 837 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 ARMC5Q96C12 935 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 INPP4AQ96PE3 977 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 SPAG5Q96R06 1193 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 PDCD2LQ9BRP1 358 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 LSM14BQ9BX40 385 aaKnown RBP9.21□□□□□ -0.94
VTI1A-207ENST00000489357 FGFBP2Q9BYJ0 223 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 LACRTQ9GZZ8 138 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 UNC93B1Q9H1C4 597 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 MROH8Q9H579 483 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 AGPAT3Q9NRZ7 376 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 SNX12Q9UMY4 172 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 EXOC7Q9UPT5 735 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 USP20Q9Y2K6 914 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 RIPK3Q9Y572 518 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 ZMYM2Q9UBW7 1377 aa9.21□□□□□ -0.94
VTI1A-207ENST00000489357 DNAJC25-GNG10A0A024R161 153 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 RSPH10B2B2RC85 870 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 ZNF263O14978 683 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 CHMP2AO43633 222 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PRPF6O94906 941 aaKnown RBP9.2□□□□□ -0.94
VTI1A-207ENST00000489357 RSPH10BP0C881 870 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 ERCC3P19447 782 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 PON1P27169 355 aa9.2□□□□□ -0.94
VTI1A-207ENST00000489357 COPB2P35606 906 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms