RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 FGAP02671 866 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 SHMT1P34896 483 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 BNIP3Q12983 259 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 HSP90AA2PQ14568 343 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 RAB3GAP1Q15042 981 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 TATDN1Q6P1N9 297 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 VSIG10LQ86VR7 867 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZNF444Q8N0Y2 327 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 SPATA9Q9BWV2 254 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 DNAJC18Q9H819 358 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZBTB21Q9ULJ3 1066 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 EMC9Q9Y3B6 208 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 DDX60LQ5H9U9 1706 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 WASH4PA8MWX3 477 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 H0Y8X5 98 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 CXCL11O14625 94 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 GH2P01242 217 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 ITGAVP06756 1048 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 SYPP08247 313 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 PCP11498 1178 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 ENDOUP21128 410 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 FLT3LGP49771 235 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 EGR3Q06889 387 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 GRB10Q13322 594 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 IMMTQ16891 758 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 CRTC3Q6UUV7 619 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 TMEM179Q6ZVK1 233 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 SLC44A5Q8NCS7 719 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 BCL7CQ8WUZ0 217 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 PARK7Q99497 189 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 RNF41Q9H4P4 317 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 C11orf49Q9H6J7 331 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 TOMM22Q9NS69 142 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 TCFL5Q9UL49 500 aa9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
TRAPPC12-221ENST00000489032 TTC28Q96AY4 2481 aa9.4□□□□□ -0.91
TRAPPC12-221ENST00000489032 ROBO3Q96MS0 1386 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 DOCK1Q14185 1865 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 CD3EP07766 207 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 ITGB7P26010 798 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 CD97P48960 835 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 NT5C2P49902 561 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 DPY19L1Q2PZI1 675 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 RNF111Q6ZNA4 994 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 MFSD6Q6ZSS7 791 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 DTX1Q86Y01 620 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 FLCNQ8NFG4 579 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 FEZ1Q99689 392 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.918e-6■■□□□ 13.2
TRAPPC12-221ENST00000489032 SH2D4AQ9H788 454 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 ANAPC4Q9UJX5 808 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 SIPA1L1O43166 1804 aa9.39□□□□□ -0.91
TRAPPC12-221ENST00000489032 MUC3AQ02505 3323 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 A0A1W2PQU0 124 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TRIM75PA6NK02 468 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TSPY2A6NKD2 308 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 C19orf81C9J6K1 198 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TNPO2O14787 897 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 FOXP2O15409 715 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 PRDM1O75626 825 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TSPY3P0CV98 308 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TSPY8P0CW00 308 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 AKR1B1P15121 316 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 USP14P54578 494 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 HAND2P61296 217 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TRDNQ13061 729 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 SPP2Q13103 211 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 PABPC4Q13310 644 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 RRP1BQ14684 758 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 GAB4Q2WGN9 574 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 RRP12Q5JTH9 1297 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 GADL1Q6ZQY3 521 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 MYLIPQ8WY64 445 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 CDC6Q99741 560 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 FOXP3Q9BZS1 431 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 TMOD4Q9NZQ9 345 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 CCDC39Q9UFE4 941 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 AFG3L2Q9Y4W6 797 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 PCDHA11Q9Y5I1 949 aa9.38□□□□□ -0.91
TRAPPC12-221ENST00000489032 MYH8P13535 1937 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 TRAV20A0A0B4J274 112 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 RANBP6O60518 1105 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 REC8O95072 547 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 MED26O95402 600 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 WNT11O96014 354 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 PRNPP04156 253 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 FOSL2P15408 326 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 CTSKP43235 329 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 BACE1P56817 501 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
TRAPPC12-221ENST00000489032 TFAP4Q01664 338 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms