RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SEC63Q9UGP8 760 aaKnown RBP5.91□□□□□ -1.46
SF3A3-207ENST00000488934 FAM184BQ9ULE4 1060 aa5.91□□□□□ -1.46
SF3A3-207ENST00000488934 PLAGL2Q9UPG8 496 aa5.91□□□□□ -1.46
SF3A3-207ENST00000488934 MRPL11Q9Y3B7 192 aaKnown RBP5.91□□□□□ -1.46
SF3A3-207ENST00000488934 RNF114Q9Y508 228 aa5.91□□□□□ -1.46
SF3A3-207ENST00000488934 RIPK3Q9Y572 518 aa5.91□□□□□ -1.46
SF3A3-207ENST00000488934 LCTP09848 1927 aa5.91□□□□□ -1.46
SF3A3-207ENST00000488934 SMCHD1A6NHR9 2005 aa5.91□□□□□ -1.46
SF3A3-207ENST00000488934 KIAA1217Q5T5P2 1943 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 PTPDC1A2A3K4 754 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 ZBTB5O15062 677 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 CILPO75339 1184 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 ZNF865P0CJ78 1059 aaPredicted RBP5.9□□□□□ -1.46
SF3A3-207ENST00000488934 GOLGA8HP0CJ92 632 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 PSMA5P28066 241 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 SMARCA1P28370 1054 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 RCAN1P53805 252 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 GRM4Q14833 912 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 PPP2R5BQ15173 497 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 RNF207Q6ZRF8 634 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 ARMCX2Q7L311 632 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 RASGRP2Q7LDG7 609 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 UBE2Q1Q7Z7E8 422 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 SPACA3Q8IXA5 215 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 ADGRF4Q8IZF3 695 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 FAM133AQ8N9E0 248 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 RGS22Q8NE09 1264 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 DPF3Q92784 378 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 CHMP4CQ96CF2 233 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 NEK1Q96PY6 1258 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 SPZ1Q9BXG8 430 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 RC3H2Q9HBD1 1191 aaKnown RBP5.9□□□□□ -1.46
SF3A3-207ENST00000488934 LY9Q9HBG7 655 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 VTA1Q9NP79 307 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 XPNPEP3Q9NQH7 507 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 RBM28Q9NW13 759 aaKnown RBP5.9□□□□□ -1.46
SF3A3-207ENST00000488934 ZHX1Q9UKY1 873 aaPredicted RBP5.9□□□□□ -1.46
SF3A3-207ENST00000488934 SLC12A7Q9Y666 1083 aa5.9□□□□□ -1.46
SF3A3-207ENST00000488934 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 CCDC196A0A1B0GTZ2 297 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 SH2B2O14492 632 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 ZEB2O60315 1214 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 DUSP11O75319 330 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 PF4P02776 101 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 PLCG1P19174 1290 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 HSPA4P34932 840 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 CHMP4BP1P59074 171 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 TAGLNQ01995 201 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 TROAPQ12815 778 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 ACVR2BQ13705 512 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 BAATQ14032 418 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 QRICH1Q2TAL8 776 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 USH1GQ495M9 461 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 MUM1L1Q5H9M0 696 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 SLC23A3Q6PIS1 610 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 BLOC1S2Q6QNY1 142 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 BNC2Q6ZN30 1099 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 STOX1Q6ZVD7 989 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 HS2ST1Q7LGA3 356 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 CHST3Q7LGC8 479 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 SGMS1Q86VZ5 419 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 MCATQ8IVS2 390 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 TEX2Q8IWB9 1127 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 CCDC144CPQ8IYA2 1237 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 ZNF654Q8IZM8 581 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 PCSK9Q8NBP7 692 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 IGDCC4Q8TDY8 1250 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 NUP133Q8WUM0 1156 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 RRP36Q96EU6 259 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 CCDC120Q96HB5 630 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 PAWRQ96IZ0 340 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 RHOVQ96L33 236 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 UBA5Q9GZZ9 404 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 TJP2Q9UDY2 1190 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 MAD2L2Q9UI95 211 aa5.89□□□□□ -1.47
SF3A3-207ENST00000488934 BAZ2BQ9UIF8 2168 aaKnown RBP5.89□□□□□ -1.47
SF3A3-207ENST00000488934 MKI67P46013 3256 aaKnown RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 hCG_1984214I3L0E3 225 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 NFIBO00712 420 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 NKRFO15226 690 aaKnown RBP eCLIP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 F13A1P00488 732 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 COL6A1P12109 1028 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 ITGB5P18084 799 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 CALML3P27482 149 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 CST5P28325 142 aaPredicted RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 ALDH5A1P51649 535 aaPredicted RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 ANTXR2P58335 489 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 SNAP25P60880 206 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 RPS6P62753 249 aaKnown RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 CNTN2Q02246 1040 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 GHRHRQ02643 423 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 TNFAIP2Q03169 654 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 MPP2Q14168 576 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 NKPD1Q17RQ9 610 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 CCDC144BQ3MJ40 725 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 BRDTQ58F21 947 aaPredicted RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 IQSEC1Q6DN90 963 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 THAP5Q7Z6K1 395 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 ATG4DQ86TL0 474 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms