RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	MCPH1	Q8NEM0	835 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	CCDC51	Q96ER9	411 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	ZFP42	Q96MM3	310 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	NXF3	Q9H4D5	531 aa	Known RBP	18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	LRWD1	Q9UFC0	647 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	USP20	Q9Y2K6	914 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	HCFC2	Q9Y5Z7	792 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	MYO10	Q9HD67	2058 aa		18.94	■□□□□ 0.62
SUN1-233	ENST00000488628	ARHGEF35	A5YM69	484 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	NPTXR	O95502	500 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	EDN1	P05305	212 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	CTSA	P10619	480 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	CYP11B2	P19099	503 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	MLH1	P40692	756 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	RNF135	Q8IUD6	432 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	CNNM3	Q8NE01	707 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	MUTYH	Q9UIF7	546 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	KIAA1024	Q9UPX6	916 aa		18.93	■□□□□ 0.62
SUN1-233	ENST00000488628	TECTA	O75443	2155 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628		A0A1B0GUA9	196 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.92	■□□□□ 0.62
SUN1-233	ENST00000488628		F8W810	466 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	NRP1	O14786	923 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	INPPL1	O15357	1258 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	DCX	O43602	365 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	ALDH2	P05091	517 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	AKAP5	P24588	427 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	GJB2	P29033	226 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	CDC25A	P30304	524 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	SCNN1G	P51170	649 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	NCBP1	Q09161	790 aa	Known RBP	18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	MCTP1	Q6DN14	999 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	KANK3	Q6NY19	840 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	COLGALT2	Q8IYK4	626 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	IGSF22	Q8N9C0	903 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	GSTCD	Q8NEC7	633 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	FEZF2	Q8TBJ5	459 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	FAM193B	Q96PV7	902 aa	Predicted RBP	18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	POP1	Q99575	1024 aa	Known RBP	18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	TMEM175	Q9BSA9	504 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	FZD8	Q9H461	694 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	MARCH5	Q9NX47	278 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	KANSL3	Q9P2N6	904 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	FAN1	Q9Y2M0	1017 aa		18.92	■□□□□ 0.62
SUN1-233	ENST00000488628	FSD2	A1L4K1	749 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	LOC730098	B7Z3J9	87 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	SSB	P05455	408 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	ALAD	P13716	330 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	EPCAM	P16422	314 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	PDIA5	Q14554	519 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	PTPN14	Q15678	1187 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	HAUS3	Q68CZ6	603 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	PPP4R3CP	Q6ZMV5	832 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	TAS1R1	Q7RTX1	841 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	C12orf76	Q8N812	135 aa	Predicted RBP	18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	TBC1D32	Q96NH3	1257 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	KIFC3	Q9BVG8	833 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	PHF7	Q9BWX1	381 aa	Predicted RBP	18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	BHMT2	Q9H2M3	363 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	UBN1	Q9NPG3	1134 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	DDX19A	Q9NUU7	478 aa	Known RBP	18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	KLK14	Q9P0G3	267 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	PRG3	Q9Y2Y8	225 aa	Predicted RBP	18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	IRAK3	Q9Y616	596 aa		18.91	■□□□□ 0.62
SUN1-233	ENST00000488628	PLXNA3	P51805	1871 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628		E9PMD0	336 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	MUT	P22033	750 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	DSC1	Q08554	894 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	CBX2	Q14781	532 aa	Predicted RBP	18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	SLC27A1	Q6PCB7	646 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	SNX29	Q8TEQ0	813 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	SLC22A17	Q8WUG5	538 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	CASP10	Q92851	521 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	RPGRIP1	Q96KN7	1286 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	MMTAG2	Q9BU76	263 aa	Known RBP	18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	TRIM6	Q9C030	488 aa	Predicted RBP	18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	CCDC113	Q9H0I3	377 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	CXCL16	Q9H2A7	254 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	GIT1	Q9Y2X7	761 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	MYH11	P35749	1972 aa		18.9	■□□□□ 0.62
SUN1-233	ENST00000488628	LILRB3	O75022	631 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	WEE2	P0C1S8	567 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	SRGAP2B	P0DMP2	458 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	LIG1	P18858	919 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	OR1G1	P47890	313 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	FAM187B	Q17R55	369 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	KCNK18	Q7Z418	384 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	ZBTB8OS	Q8IWT0	167 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	RABGGTA	Q92696	567 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	PDZD7	Q9H5P4	517 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	UPF2	Q9HAU5	1272 aa	Known RBP	18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	CACNG4	Q9UBN1	327 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	PARP2	Q9UGN5	583 aa		18.89	■□□□□ 0.61
SUN1-233	ENST00000488628	C2orf16	Q68DN1	1984 aa		18.88	■□□□□ 0.61
SUN1-233	ENST00000488628	CARNS1	A5YM72	827 aa		18.88	■□□□□ 0.61
SUN1-233	ENST00000488628	EFEMP2	O95967	443 aa		18.88	■□□□□ 0.61

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