RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ECHS1P30084 290 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 MCAMP43121 646 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 WNT3AP56704 352 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 RIN1Q13671 783 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 UAP1L1Q3KQV9 507 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 TMEM240Q5SV17 173 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 GJC2Q5T442 439 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 MIER2Q8N344 545 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 CPA6Q8N4T0 437 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 OR5M3Q8NGP4 307 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 OR14A2Q96R54 314 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 UHRF1Q96T88 793 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 GPHA2Q96T91 129 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 CSRNP2Q9H175 543 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 MEGF9Q9H1U4 602 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 EPC1Q9H2F5 836 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 IL23AQ9NPF7 189 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 PPP4R1LQ9P1A2 415 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 TUBD1Q9UJT1 453 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 ZNF180Q9UJW8 692 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 INTUQ9ULD6 942 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 EID1Q9Y6B2 187 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 A0A0G2JLL6 359 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 UBE2QL1A1L167 161 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 PF4V1P10720 104 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 GYPEP15421 78 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 CASRP41180 1078 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 NPEPPSP55786 919 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 PER3P56645 1201 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 SAFB2Q14151 953 aaKnown RBP eCLIP5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 NFIXQ14938 502 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 C19orf54Q5BKX5 351 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 LIMS2Q7Z4I7 341 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 CIR1Q86X95 450 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 RAVER1Q8IY67 606 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 CMTR2Q8IYT2 770 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 CMTM4Q8IZR5 234 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 ZNF480Q8WV37 535 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 NRG4Q8WWG1 115 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 ARL8AQ96BM9 186 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 HSPBAP1Q96EW2 488 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 TMEM176AQ96HP8 235 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 CDC5LQ99459 802 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 BDH2Q9BUT1 245 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 PLA2G12BQ9BX93 195 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 NELFAQ9H3P2 528 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 RTEL1Q9NZ71 1219 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 SCOCQ9UIL1 159 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 GIT1Q9Y2X7 761 aa5.07□□□□□ -1.6
ECHDC1-217ENST00000488087 PMS2P1A4D2B8 440 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 ABLIM3O94929 683 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 RPS19P39019 145 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 BUD31P41223 144 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 ADKP55263 362 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 PPP3CAQ08209 521 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 GRM7Q14831 915 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 PPP2R5AQ15172 486 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 MST1LQ2TV78 715 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 ERICH6BQ5W0A0 696 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 MIGA2Q7L4E1 593 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 GPR135Q8IZ08 494 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 JPH3Q8WXH2 748 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 DPF2Q92785 391 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 C7orf25Q9BPX7 421 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 TCF25Q9BQ70 676 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 MSL2Q9HCI7 577 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 ANKRD6Q9Y2G4 727 aa5.06□□□□□ -1.6
ECHDC1-217ENST00000488087 FAM171A2A8MVW0 826 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 ITGA10O75578 1167 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 ENDOD1O94919 500 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 ZRANB2O95218 330 aaKnown RBP eCLIP5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 VCAM1P19320 739 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 PTPN7P35236 360 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 ADAM8P78325 824 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 MGAT2Q10469 447 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 TTLL10Q6ZVT0 673 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 ADGRE4PQ86SQ3 457 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 RHOT1Q8IXI2 618 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 CHPFQ8IZ52 775 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 HDAC10Q969S8 669 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 COA7Q96BR5 231 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 RHOBTB2Q9BYZ6 727 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 CDH19Q9H159 772 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 AGO3Q9H9G7 860 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 GPRC5DQ9NZD1 345 aa5.05□□□□□ -1.6
ECHDC1-217ENST00000488087 CCDC154A6NI56 674 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 GPR42O15529 346 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 ADCY6O43306 1168 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 SCGB1D2O95969 90 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 GASTP01350 101 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 CRHR1P34998 444 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 GZMKP49863 264 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 CTSWP56202 376 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 PLP2Q04941 152 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 NFE2Q16621 373 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 TCTN3Q6NUS6 607 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 FAM111BQ6SJ93 734 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 Q6ZVL8 140 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms