RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 RBM28Q9NW13 759 aaKnown RBP7.42□□□□□ -1.22
SEC22C-215ENST00000487701 ADD3Q9UEY8 706 aaKnown RBP7.42□□□□□ -1.22
SEC22C-215ENST00000487701 PARP2Q9UGN5 583 aa7.42□□□□□ -1.22
SEC22C-215ENST00000487701 PCOLCE2Q9UKZ9 415 aa7.42□□□□□ -1.22
SEC22C-215ENST00000487701 NAP1L2Q9ULW6 460 aaPredicted RBP7.42□□□□□ -1.22
SEC22C-215ENST00000487701 SYNRGQ9UMZ2 1314 aa7.42□□□□□ -1.22
SEC22C-215ENST00000487701 MYH9P35579 1960 aaKnown RBP7.42□□□□□ -1.22
SEC22C-215ENST00000487701 LOC102724159A0A0B4J2E5 919 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 CTAGE5O15320 804 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 RARBP10826 455 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 CAPN2P17655 700 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 PDIA3P30101 505 aaKnown RBP7.41□□□□□ -1.22
SEC22C-215ENST00000487701 ADCYAP1R1P41586 468 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 PWP2Q15269 919 aaKnown RBP7.41□□□□□ -1.22
SEC22C-215ENST00000487701 LRRC41Q15345 812 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 NTRK3Q16288 839 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 GJC2Q5T442 439 aaPredicted RBP7.41□□□□□ -1.22
SEC22C-215ENST00000487701 WWC2Q6AWC2 1192 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 OGFOD3Q6PK18 319 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 HEATR3Q7Z4Q2 680 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 C12orf40Q86WS4 652 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 DNERQ8NFT8 737 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 IL31RAQ8NI17 732 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 RMDN3Q96TC7 470 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 MAF1Q9H063 256 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 UPF3AQ9H1J1 476 aaKnown RBP7.41□□□□□ -1.22
SEC22C-215ENST00000487701 VTA1Q9NP79 307 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 XPNPEP3Q9NQH7 507 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 PXMP2Q9NR77 195 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 PDRG1Q9NUG6 133 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 SEC63Q9UGP8 760 aaKnown RBP7.41□□□□□ -1.22
SEC22C-215ENST00000487701 FAM184BQ9ULE4 1060 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 FRMPD4Q14CM0 1322 aa7.41□□□□□ -1.22
SEC22C-215ENST00000487701 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 PRAMEF27A3QJZ7 478 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 GCOM1H8Y6P7 765 aaPredicted RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 STXBP3O00186 592 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 DNM1LO00429 736 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 MEIS2O14770 477 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 DUSP11O75319 330 aaKnown RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 ARIH2O95376 493 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 POLR2MP0CAP2 368 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 CCT2P78371 535 aaKnown RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 PKN1Q16512 942 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 CCSAPQ6IQ19 270 aaPredicted RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 USP17L6PQ6QN14 398 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 NECAB2Q7Z6G3 386 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 SAMD3Q8N6K7 520 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 KLHDC9Q8NEP7 349 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 NSUN6Q8TEA1 469 aaKnown RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 PHKBQ93100 1093 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 FAM161BQ96MY7 647 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 KIF2CQ99661 725 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 C11orf49Q9H6J7 331 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 CACNA2D2Q9NY47 1150 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 TPCN1Q9ULQ1 816 aa7.4□□□□□ -1.22
SEC22C-215ENST00000487701 OAS3Q9Y6K5 1087 aaKnown RBP7.4□□□□□ -1.22
SEC22C-215ENST00000487701 LAMA3Q16787 3333 aa7.4□□□□□ -1.23
SEC22C-215ENST00000487701 SCN5AQ14524 2016 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 LOXHD1Q8IVV2 1947 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 CCDC196A0A1B0GTZ2 297 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 ADAMTS3O15072 1205 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 DTNBO60941 627 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 LARGE1O95461 756 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 CST5P28325 142 aaPredicted RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 AK2P54819 239 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 GJA9P57773 515 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 TNFAIP2Q03169 654 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 SCRN1Q12765 414 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 TRAF1Q13077 416 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 STK3Q13188 491 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 PGM5Q15124 567 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 PPP2R5BQ15173 497 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 UBE2SQ16763 222 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 PFKFB3Q16875 520 aaPredicted RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 LRRC26Q2I0M4 334 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 ARHGEF16Q5VV41 709 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 TLK2Q86UE8 772 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 VSIG10LQ86VR7 867 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 ARRDC4Q8NCT1 418 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 ZNF274Q96GC6 653 aaPredicted RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 IWS1Q96ST2 819 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 WDR11Q9BZH6 1224 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 ALDH8A1Q9H2A2 487 aaPredicted RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 PSTPIP2Q9H939 334 aa7.39□□□□□ -1.23
SEC22C-215ENST00000487701 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
SEC22C-215ENST00000487701 TANC1Q9C0D5 1861 aa7.38□□□□□ -1.23
SEC22C-215ENST00000487701 KBTBD13C9JR72 458 aa7.38□□□□□ -1.23
SEC22C-215ENST00000487701 PRPF3O43395 683 aaKnown RBP7.38□□□□□ -1.23
SEC22C-215ENST00000487701 LEFTY1O75610 366 aa7.38□□□□□ -1.23
SEC22C-215ENST00000487701 C6orf222P0C671 652 aaPredicted RBP7.38□□□□□ -1.23
SEC22C-215ENST00000487701 SCG2P13521 617 aa7.38□□□□□ -1.23
SEC22C-215ENST00000487701 IFNAR1P17181 557 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms