RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 IFNAR2P48551 515 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 COBLL1Q53SF7 1204 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 LGSNQ5TDP6 509 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 FKBP1CQ5VVH2 108 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
TRA2B-214ENST00000487615 PPP1R21Q6ZMI0 780 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 TRIM72Q6ZMU5 477 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 SAMD3Q8N6K7 520 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 MRPL4Q9BYD3 311 aaKnown RBP12.65□□□□□ -0.38
TRA2B-214ENST00000487615 AIPL1Q9NZN9 384 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 PPP1R9AQ9ULJ8 1098 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 EML1O00423 815 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CYP2C19P33261 490 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 LIG3P49916 1009 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 STAT5BP51692 787 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF568Q3ZCX4 644 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 C6orf163Q5TEZ5 329 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 SCYL3Q8IZE3 742 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 C2orf40Q9H1Z8 148 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 PNMA3Q9UL41 463 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 DUOX1Q9NRD9 1551 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 HGSO14964 777 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 TLR3O15455 904 aaKnown RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 GGPS1O95749 300 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 VIL1P09327 827 aaKnown RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 PPP2R5CQ13362 524 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 PACSIN1Q9BY11 444 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 SUCLA2Q9P2R7 463 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 UVRAGQ9P2Y5 699 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 IGSF9BQ9UPX0 1349 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 A0A0U1RQJ8 604 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 MYBL1P10243 752 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 WDR59Q6PJI9 974 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 CCDC137Q6PK04 289 aaKnown RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 NLRP7Q8WX94 980 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 SLC5A5Q92911 643 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 TMEM143Q96AN5 459 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 MTMR8Q96EF0 704 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 ZNF699Q32M78 642 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 C6orf118Q5T5N4 469 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 PCNX4Q63HM2 1172 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 VSIG1Q86XK7 387 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 CTAGE3PQ8IX95 158 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 SYTL5Q8TDW5 730 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 HAUS1Q96CS2 278 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 RAD51CO43502 376 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 CALB1P05937 261 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 CARSP49589 748 aaKnown RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 ACOT2P49753 483 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 EFNA5P52803 228 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 TATDN1Q6P1N9 297 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 ZNF571Q7Z3V5 609 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 RFX6Q8HWS3 928 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 TAB3Q8N5C8 712 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 SLC35C1Q96A29 364 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 RBM41Q96IZ5 413 aaKnown RBP12.64□□□□□ -0.39
TRA2B-214ENST00000487615 PPP1R16BQ96T49 567 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 GPRC5CQ9NQ84 441 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
TRA2B-214ENST00000487615 NUP98P52948 1817 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 WNT10BO00744 389 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 TTI1O43156 1089 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 VCAM1P19320 739 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 EMC2Q15006 297 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 CBWD1Q9BRT8 395 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 HEMGNQ9BXL5 484 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 RAB21Q9UL25 225 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 H7C0C1 242 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 PPP1R11O60927 126 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-214ENST00000487615 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
TRA2B-214ENST00000487615 SCP2P22307 547 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 ATP5OP48047 213 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 IFT88Q13099 833 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 MYBPC2Q14324 1141 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 RHPN2Q8IUC4 686 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 SLC10A4Q96EP9 437 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 ATP6V1G3Q96LB4 118 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 PDCD2LQ9BRP1 358 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 COL18A1P39060 1754 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 FRMPD4Q14CM0 1322 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 POC1B-GALNT4F8VUJ3 575 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 FOXN3O00409 490 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-214ENST00000487615 XPOTO43592 962 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms