RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CEP68Q76N32 757 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 WDR5BQ86VZ2 330 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 PALB2Q86YC2 1186 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 ITFG1Q8TB96 612 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 PLA2G2FQ9BZM2 168 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 GBP3Q9H0R5 595 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 CFAP46Q8IYW2 2715 aa13.27□□□□□ -0.29
TRIM56-204ENST00000487252 CCNE2O96020 404 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 CLCN3P51790 818 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 TROAPQ12815 778 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 ITGB3BPQ13352 177 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-204ENST00000487252 SEC23AQ15436 765 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 COL28A1Q2UY09 1125 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 C20orf194Q5TEA3 1177 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-204ENST00000487252 CCDC60Q8IWA6 550 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-204ENST00000487252 NPAS3Q8IXF0 933 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 SMOC1Q9H4F8 434 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 VPS45Q9NRW7 570 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 FNIP2Q9P278 1114 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
TRIM56-204ENST00000487252 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 B4E1Z4 1266 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 POU2F2P09086 479 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 HNRNPA1P09651 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIM56-204ENST00000487252 SKIP12755 728 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 FGFR4P22455 802 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 HOXA9P31269 272 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 GPC3P51654 580 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 AFF1P51825 1210 aaKnown RBP13.25□□□□□ -0.29
TRIM56-204ENST00000487252 PTGDRQ13258 359 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 GRM4Q14833 912 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 MCMDC2Q4G0Z9 681 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 CUL5Q93034 780 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 FAM227BQ96M60 508 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 TRPV5Q9NQA5 729 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 FAM105AQ9NUU6 356 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 KCNH3Q9ULD8 1083 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 HECTD1Q9ULT8 2610 aa13.25□□□□□ -0.29
TRIM56-204ENST00000487252 MYH9P35579 1960 aaKnown RBP13.24□□□□□ -0.29
TRIM56-204ENST00000487252 MAGEB2O15479 319 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 HYAL3O43820 417 aaPredicted RBP13.24□□□□□ -0.29
TRIM56-204ENST00000487252 MPLP40238 635 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 IFIT1BQ5T764 474 aaKnown RBP13.24□□□□□ -0.29
TRIM56-204ENST00000487252 FAM160B1Q5W0V3 765 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 TCEAL6Q6IPX3 200 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 KBTBD6Q86V97 674 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 GAB3Q8WWW8 586 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 FAM3CQ92520 227 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 TCEAL3Q969E4 200 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 ZC3H10Q96K80 434 aaKnown RBP13.24□□□□□ -0.29
TRIM56-204ENST00000487252 EDEM2Q9BV94 578 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 DCTPP1Q9H773 170 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRIM56-204ENST00000487252 C2orf42Q9NWW7 574 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 KLK13Q9UKR3 277 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 AKT3Q9Y243 479 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
TRIM56-204ENST00000487252 MYO18BQ8IUG5 2567 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 HOXC13P31276 330 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 HEATR6Q6AI08 1181 aaKnown RBP13.23□□□□□ -0.29
TRIM56-204ENST00000487252 EFCAB12Q6NXP0 572 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 MAP4K3Q8IVH8 894 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 ELSPBP1Q96BH3 223 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 MAP7D2Q96T17 732 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 MXRA8Q9BRK3 442 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 GDE1Q9NZC3 331 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 KANSL3Q9P2N6 904 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 DACH1Q9UI36 760 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 MAFBQ9Y5Q3 323 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-204ENST00000487252 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 ASXL3Q9C0F0 2248 aa13.23□□□□□ -0.29
TRIM56-204ENST00000487252 CCDC163A0A0D9SF12 145 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 ZNF213O14771 459 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 BACH1O14867 736 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 ABCB7O75027 752 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 CSDE1O75534 798 aaKnown RBP13.22□□□□□ -0.29
TRIM56-204ENST00000487252 MS4A1P11836 297 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 FCARP24071 287 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 RAB27AP51159 221 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 MLLT6P55198 1093 aaPredicted RBP13.22□□□□□ -0.29
TRIM56-204ENST00000487252 WDR44Q5JSH3 913 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 TANGO2Q6ICL3 276 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 COLGALT2Q8IYK4 626 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 OTUD7AQ8TE49 926 aaPredicted RBP13.22□□□□□ -0.29
TRIM56-204ENST00000487252 ZNF668Q96K58 619 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms