RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TMEM192Q8IY95 271 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 CMTR2Q8IYT2 770 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 FIBCD1Q8N539 461 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 LRRC15Q8TF66 581 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 TCP11Q8WWU5 503 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 CLP1Q92989 425 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 LPPQ93052 612 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 PNMA5Q96PV4 448 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 NACC1Q96RE7 527 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 RUSC1Q9BVN2 902 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 BHMT2Q9H2M3 363 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 C1orf112Q9NSG2 853 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 AGPAT5Q9NUQ2 364 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 TMEM161AQ9NX61 479 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 LRFN2Q9ULH4 789 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 PIN4Q9Y237 131 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 PCDHB7Q9Y5E2 793 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 TDRD15B5MCY1 1934 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 TCF20Q9UGU0 1960 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 A0A0U1RQF3 1178 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 ARHGEF35A5YM69 484 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 LRRIQ4A6NIV6 560 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 NRG2O14511 850 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 STX6O43752 255 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 TSPAN1O60635 241 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 STAG3L1P0CL83 205 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 XRCC6P12956 609 aaKnown RBP eCLIP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 ZSCAN20P17040 1043 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 CYP11B2P19099 503 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 HOXA11P31270 313 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 PBX3P40426 434 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 PHKA2P46019 1235 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 PTENP60484 403 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 CEBPZQ03701 1054 aaKnown RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 MBTD1Q05BQ5 628 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 MXD4Q14582 209 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 PTPAQ15257 358 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 UBXN11Q5T124 520 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 KRT79Q5XKE5 535 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 TWF2Q6IBS0 349 aaKnown RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 LRRC55Q6ZSA7 311 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 EXOC8Q8IYI6 725 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-209ENST00000487244 CPB2Q96IY4 423 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 CASD1Q96PB1 797 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 KIFC3Q9BVG8 833 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 USP20Q9Y2K6 914 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 NCOR1O75376 2440 aa7.94□□□□□ -1.14
UBE4B-209ENST00000487244 TCHHQ07283 1943 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 C5orf67F2Z3F1 127 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 H3BNC9 293 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 INO80B-WBP1J3KQ70 363 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 GRM6O15303 877 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 ASAP2O43150 1006 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 B4GALT3O60512 393 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 LILRB3O75022 631 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 ERLIN2O94905 339 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 EYA4O95677 639 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 EDN1P05305 212 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 ITGB1P05556 798 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 POU3F3P20264 500 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 MUTP22033 750 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 DNAJB1P25685 340 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 MARCKSP29966 332 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 BMPR1AP36894 532 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 AFF1P51825 1210 aaKnown RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CDC42EP1Q00587 391 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 FOXC1Q12948 553 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 MAPK7Q13164 816 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 GPM6BQ13491 265 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CAMK1Q14012 370 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 TFDP1Q14186 410 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 QPCTQ16769 361 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 PTPRNQ16849 979 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 TMEM119Q4V9L6 283 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 SPECC1Q5M775 1068 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 HYIQ5T013 277 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 ARL6IP4Q66PJ3 421 aaKnown RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CDCA2Q69YH5 1023 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 USP49Q70CQ1 688 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 SRGAP1Q7Z6B7 1085 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CDR2LQ86X02 465 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 DAW1Q8N136 415 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 SLC17A8Q8NDX2 589 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 MCPH1Q8NEM0 835 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 HELQQ8TDG4 1101 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 TSC1Q92574 1164 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 USP28Q96RU2 1077 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 EIF2AQ9BY44 585 aaKnown RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 RAB34Q9BZG1 259 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 INO80BQ9C086 356 aaPredicted RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CWH43Q9H720 699 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 ELAC1Q9H777 363 aaKnown RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 ALG13Q9NP73 1137 aaKnown RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 CHST12Q9NRB3 414 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 FAM105AQ9NUU6 356 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms