RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 INPPL1O15357 1258 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 GLUD1P00367 558 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 CFHP08603 1231 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 MYBP10242 640 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 GBP2P32456 591 aaPredicted RBP21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 GLUD2P49448 558 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 EMC2Q15006 297 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 KIAA0319Q5VV43 1072 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 CYP26C1Q6V0L0 522 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 RUFY3Q7L099 469 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 FERMT3Q86UX7 667 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 GAD1Q99259 594 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 LXNQ9BS40 222 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 EIF2AQ9BY44 585 aaKnown RBP21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 RNF39Q9H2S5 420 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 RXFP1Q9HBX9 757 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 KCNJ14Q9UNX9 436 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 CLUHO75153 1309 aa21.71■■□□□ 1.07
SMPDL3A-202ENST00000487215 KRBA1A5PL33 1030 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 GAS2O43903 313 aaKnown RBP21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 TSPAN1O60635 241 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 RFPL2O75678 378 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 ERLIN2O94905 339 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 YWHABP31946 246 aaKnown RBP21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 MLH1P40692 756 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 DSC1Q08554 894 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 ELMSAN1Q6PJG2 1045 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 C4orf19Q8IY42 314 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 TCP11Q8WWU5 503 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 STAMQ92783 540 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 MYADMQ96S97 322 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 LARP6Q9BRS8 491 aaKnown RBP21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 EPS15L1Q9UBC2 864 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 WNT16Q9UBV4 365 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 DPP7Q9UHL4 492 aa21.7■■□□□ 1.06
SMPDL3A-202ENST00000487215 ARL5CA6NH57 179 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 F8W810 466 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 ASAP2O43150 1006 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 SCNN1GP51170 649 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 DSG1Q02413 1049 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 EPHA7Q15375 998 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 PPP4R3AQ6IN85 833 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 NEK8Q86SG6 692 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 SMG7Q92540 1137 aaKnown RBP21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 HAS1Q92839 578 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 ZNF707Q96C28 371 aaPredicted RBP21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 ZNF274Q96GC6 653 aaPredicted RBP21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 ZSWIM6Q9HCJ5 1215 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 MIOSQ9NXC5 875 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 RGL1Q9NZL6 768 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 HES2Q9Y543 173 aa21.69■■□□□ 1.06
SMPDL3A-202ENST00000487215 FAM186AA6NE01 2351 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 RIF1Q5UIP0 2472 aaKnown RBP21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 SPTBN4Q9H254 2564 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 CCDC194A0A1B0GVG4 234 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 GCFC2P16383 781 aaKnown RBP21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 STK3Q13188 491 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 XKR9Q5GH70 373 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 NOTUMQ6P988 496 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 OTUD6AQ7L8S5 288 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 SLC44A3Q8N4M1 653 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 CCDC51Q96ER9 411 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 CPB2Q96IY4 423 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 ZFP42Q96MM3 310 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 MTRQ99707 1265 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 CA14Q9ULX7 337 aa21.68■■□□□ 1.06
SMPDL3A-202ENST00000487215 STK25O00506 426 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 ZBTB39O15060 712 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 REC8O95072 547 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 PAPLNO95428 1278 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 SPATA31D3P0C874 917 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 AXLP30530 894 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 ID4P47928 161 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 PTENP60484 403 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 PCBP1Q15365 356 aaKnown RBP eCLIP21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 NCAPH2Q6IBW4 605 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 CPLX2Q6PUV4 134 aaKnown RBP21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 SPATA31D4Q6ZUB0 917 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 ERMP1Q7Z2K6 904 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 HDAC7Q8WUI4 952 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 DYDC2Q96IM9 177 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 B3GALT6Q96L58 329 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 PHF20Q9BVI0 1012 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 CSRNP2Q9H175 543 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 XPNPEP1Q9NQW7 623 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 CHST7Q9NS84 486 aa21.67■■□□□ 1.06
SMPDL3A-202ENST00000487215 TBX3O15119 743 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 CCNT1O60563 726 aaKnown RBP21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 SRFP11831 508 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 RFX1P22670 979 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 CYP4A11Q02928 519 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 SPIRE1Q08AE8 756 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 CTTNQ14247 550 aaKnown RBP21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 PALB2Q86YC2 1186 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 NXPE3Q969Y0 559 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 COLEC11Q9BWP8 271 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 APOL6Q9BWW8 343 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 ZSWIM4Q9H7M6 989 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 TBC1D17Q9HA65 648 aa21.66■■□□□ 1.06
SMPDL3A-202ENST00000487215 CYP46A1Q9Y6A2 500 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms