RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SMC1BQ8NDV3 1235 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 MAML1Q92585 1016 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 DDX27Q96GQ7 796 aaKnown RBP8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 FAM161BQ96MY7 647 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 TTC1Q99614 292 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 NEUROG2Q9H2A3 272 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 TTC7AQ9ULT0 858 aaPredicted RBP8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 ZC3H4Q9UPT8 1303 aaKnown RBP8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 TLR2O60603 784 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 CYP11B2P19099 503 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 VHLP40337 213 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 SERPINB4P48594 390 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 C4orf33Q8N1A6 199 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 ARHGAP18Q8N392 663 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 SREK1Q8WXA9 508 aaKnown RBP8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 MAK16Q9BXY0 300 aaKnown RBP8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 NPHS2Q9NP85 383 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 UBN1Q9NPG3 1134 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 FMN2Q9NZ56 1722 aa8.18□□□□□ -1.1
COL6A4P1-202ENST00000487147 ESYT2A0FGR8 921 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RBAK-RBAKDNI3L0D1 243 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 HNRNPCL1O60812 293 aaKnown RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 CCDC22O60826 627 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NMT1P30419 496 aaKnown RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RPL21P46778 160 aaKnown RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ERFP50548 548 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 COG7P83436 770 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ARHGAP4P98171 946 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 PPP1R18Q6NYC8 613 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 C6orf89Q6UWU4 347 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 SLC13A5Q86YT5 568 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ATL2Q8NHH9 583 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 PYROXD1Q8WU10 500 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TTC17Q96AE7 1141 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TTC25Q96NG3 672 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NUDT12Q9BQG2 462 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ZSWIM1Q9BR11 485 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 SERPINB13Q9UIV8 391 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 BCS1LQ9Y276 419 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 THRAP3Q9Y2W1 955 aaKnown RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 MRC1P22897 1456 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 USP17L10C9JJH3 530 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 GNPATO15228 680 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RTN2O75298 545 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 AP1G2O75843 785 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NUDT17P0C025 328 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TNNI1P19237 187 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RASA1P20936 1047 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 MMP13P45452 471 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ITGA8P53708 1063 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NCALDP61601 193 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 GTF2IP78347 998 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 CNGA2Q16280 664 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 THEMIS2Q5TEJ8 643 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 WDR78Q5VTH9 848 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TRIM11Q96F44 468 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 MAGEB18Q96M61 343 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RBM15Q96T37 977 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TCHPQ9BT92 498 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 SENP1Q9P0U3 644 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TXNDC16Q9P2K2 825 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 SMG5Q9UPR3 1016 aaKnown RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 MAFGO15525 162 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 KRT16P08779 473 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RFX1P22670 979 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 CASP4P49662 377 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 YWHAGP61981 247 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TCP10Q12799 353 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NPY5RQ15761 445 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ADGRF4Q8IZF3 695 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 SPICE1Q8N0Z3 855 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 ITFG2Q969R8 447 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TMEM206Q9H813 350 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 DCLRE1BQ9H816 532 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 CORO1CQ9ULV4 474 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 PHTF1Q9UMS5 762 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 NID2Q14112 1375 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 SPATA31A3Q5VYP0 1347 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 C5orf60A6NFR6 353 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 CYTH3O43739 400 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 AKAP3O75969 853 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 KCNK18Q7Z418 384 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 CNBD1Q8NA66 436 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 TMEM94Q12767 1356 aa8.17□□□□□ -1.1
COL6A4P1-202ENST00000487147 EMSYQ7Z589 1322 aa8.16□□□□□ -1.1
COL6A4P1-202ENST00000487147 ATMINO43313 823 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms