RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ULK2Q8IYT8 1036 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 C7orf31Q8N865 590 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 ZNF610Q8N9Z0 462 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 CLRN3Q8NCR9 226 aa6.09□□□□□ -1.43
SMC4-218ENST00000486711 PITHD1Q9GZP4 211 aaPredicted RBP6.09□□□□□ -1.43
SMC4-218ENST00000486711 GOLGA6L6A8MZA4 724 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 K7ESF4 209 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 RABGGTBP53611 331 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 MAN2A1Q16706 1144 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 HSP90AB2PQ58FF8 381 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 ATXN2LQ8WWM7 1075 aaKnown RBP6.08□□□□□ -1.44
SMC4-218ENST00000486711 NRDE2Q9H7Z3 1164 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 AASDHPPTQ9NRN7 309 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 GPRC5BQ9NZH0 403 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 CHPF2Q9P2E5 772 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 NCDNQ9UBB6 729 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 EID1Q9Y6B2 187 aa6.08□□□□□ -1.44
SMC4-218ENST00000486711 XDHP47989 1333 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 A0A0A6YYJ9 748 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 E2F8A0AVK6 867 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 SHTN1A0MZ66 631 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 KLRG2A4D1S0 409 aaPredicted RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 TMEM191CA6NGB0 347 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 GABRDO14764 452 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 MTSS1O43312 755 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 RPS6KA4O75676 772 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 MYBL2P10244 700 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 HNRNPLP14866 589 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMC4-218ENST00000486711 CCND1P24385 295 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 KIR2DL3P43628 341 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 NPEPPSP55786 919 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 KLF1Q13351 362 aaPredicted RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 LRRC32Q14392 662 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 ESRP1Q6NXG1 681 aaKnown RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 HTR3DQ70Z44 454 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 NOL8Q76FK4 1167 aaKnown RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 KANSL1Q7Z3B3 1105 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 FMNL3Q8IVF7 1028 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 CMTM4Q8IZR5 234 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 CHMP4CQ96CF2 233 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 CCDC136Q96JN2 1154 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 ZNF512Q96ME7 567 aaPredicted RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 MNTQ99583 582 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 OSBPL6Q9BZF3 934 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 MTG2Q9H4K7 406 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 C14orf119Q9NWQ9 140 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 USP36Q9P275 1121 aaKnown RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 KCNG1Q9UIX4 513 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 THRAP3Q9Y2W1 955 aaKnown RBP6.07□□□□□ -1.44
SMC4-218ENST00000486711 DMRT1Q9Y5R6 373 aa6.07□□□□□ -1.44
SMC4-218ENST00000486711 GOLGA8AA7E2F4 631 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 KDM1AO60341 852 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 PRPF6O94906 941 aaKnown RBP6.06□□□□□ -1.44
SMC4-218ENST00000486711 FSBPO95073 299 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 APOL3O95236 402 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 CFBP00751 764 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 NANOS3P60323 173 aaKnown RBP6.06□□□□□ -1.44
SMC4-218ENST00000486711 SPIDRQ14159 915 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 PPP2R5AQ15172 486 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 PTPN21Q16825 1174 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 RABL3Q5HYI8 236 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 CCDC181Q5TID7 509 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 KIAA1841Q6NSI8 718 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 PCSK4Q6UW60 755 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 AMOTL1Q8IY63 956 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 ELOA2Q8IYF1 753 aaPredicted RBP6.06□□□□□ -1.44
SMC4-218ENST00000486711 MB21D1Q8N884 522 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 MDGA1Q8NFP4 955 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 SLC25A43Q8WUT9 341 aaPredicted RBP6.06□□□□□ -1.44
SMC4-218ENST00000486711 HAS1Q92839 578 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 AGAP2Q99490 1192 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 TTPALQ9BTX7 342 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 VTA1Q9NP79 307 aa6.06□□□□□ -1.44
SMC4-218ENST00000486711 FOXN1O15353 648 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 OPHN1O60890 802 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 FAM20BO75063 409 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 PPFIA2O75334 1257 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 MT-CO1P00395 513 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 KRT4P19013 534 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 SCAND1P57086 179 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 ERVK-21P61565 698 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 MCL1Q07820 350 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 ABCB5Q2M3G0 1257 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 DCAF17Q5H9S7 520 aaPredicted RBP6.05□□□□□ -1.44
SMC4-218ENST00000486711 Q6ZPA2 131 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 ZG16BQ96DA0 208 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 HIST1H2AHQ96KK5 128 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 ACAP3Q96P50 834 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 UIMC1Q96RL1 719 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 HIST1H2AJQ99878 128 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 MYL10Q9BUA6 226 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 ZMAT4Q9H898 229 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 MSRAQ9UJ68 235 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 MRFAP1Q9Y605 127 aa6.05□□□□□ -1.44
SMC4-218ENST00000486711 NRP1O14786 923 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 SNUPNO95149 360 aaKnown RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 GNAT2P19087 354 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms