RNA–Protein interactions for RNA: ENST00000486261.5

KRIT1-222, Transcript of KRIT1, ankyrin repeat containing, human

TSL 1 (best)

Gene KRIT1, Length 4,057 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-222	ENST00000486261	TWF2	Q6IBS0	349 aa	Known RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	USP17L6P	Q6QN14	398 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	ZNF410	Q86VK4	478 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	SIX5	Q8N196	739 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	STAG2	Q8N3U4	1231 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	SYAP1	Q96A49	352 aa	Predicted RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	ACSF2	Q96CM8	615 aa	Predicted RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	FAM81B	Q96LP2	452 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	NECTIN4	Q96NY8	510 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	COLEC11	Q9BWP8	271 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	CELF4	Q9BZC1	486 aa	Known RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	IQCG	Q9H095	443 aa	Known RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	NGRN	Q9NPE2	291 aa	Known RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	TRMT13	Q9NUP7	481 aa	Known RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	SEPT9	Q9UHD8	586 aa	Predicted RBP	5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	ODF2L	Q9ULJ1	636 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	PCDHA4	Q9UN74	947 aa		5.27	□□□□□ -1.57
KRIT1-222	ENST00000486261	NAV1	Q8NEY1	1877 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TRAPPC3	O43617	180 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	AXL	P30530	894 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SREBF1	P36956	1147 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	MATR3	P43243	847 aa	Known RBP eCLIP	5.26	□□□□□ -1.57	1e-6	■■■■□ 24.3
KRIT1-222	ENST00000486261	NEK4	P51957	841 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SKOR1	P84550	965 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	GHRHR	Q02643	423 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SEPT6	Q14141	434 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	MXD4	Q14582	209 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	ALF	Q53S48	1182 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	RUFY3	Q7L099	469 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CMTR2	Q8IYT2	770 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	KLHL23	Q8NBE8	558 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	FAM200A	Q8TCP9	573 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CALML4	Q96GE6	196 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SCLY	Q96I15	445 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	DEF6	Q9H4E7	631 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SETD4	Q9NVD3	440 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CCDC39	Q9UFE4	941 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TRIM43B	A6NCK2	446 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	ZBTB24	O43167	697 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CD4	P01730	458 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	P4HB	P07237	508 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	GHR	P10912	638 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	ELF1	P32519	619 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CTNNA1	P35221	906 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CDKN1C	P49918	316 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PLIN5	Q00G26	463 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PTH1R	Q03431	593 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	RBL2	Q08999	1139 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	KYAT1	Q16773	422 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	LETM2	Q2VYF4	491 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CRTC2	Q53ET0	693 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	INO80D	Q53TQ3	878 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	XKR9	Q5GH70	373 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SWSAP1	Q6NVH7	229 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CYB5R4	Q7L1T6	521 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	SERINC5	Q86VE9	423 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	OR8H2	Q8N162	312 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TAB3	Q8N5C8	712 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	EFCAB3	Q8N7B9	438 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	DBF4B	Q8NFT6	615 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	DEPTOR	Q8TB45	409 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	IGDCC4	Q8TDY8	1250 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	UCMA	Q8WVF2	138 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	LSG1	Q9H089	658 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TMEM117	Q9H0C3	514 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	MFSD1	Q9H3U5	465 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TLE6	Q9H808	572 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PIDD1	Q9HB75	910 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	ENTPD7	Q9NQZ7	604 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	DZANK1	Q9NVP4	752 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	MKS1	Q9NXB0	559 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	UTP6	Q9NYH9	597 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PCDHA2	Q9Y5H9	948 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	UBIAD1	Q9Y5Z9	338 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PIP5K1C	O60331	668 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	ZNF286B	P0CG31	522 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CKB	P12277	381 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	INSRR	P14616	1297 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	USP8	P40818	1118 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	HAL	P42357	657 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CRYBB1	P53674	252 aa	Predicted RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	STRN3	Q13033	797 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TAF12	Q16514	161 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PHLDB3	Q6NSJ2	640 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CCDC62	Q6P9F0	684 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TMC7	Q7Z402	723 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	COPS5	Q92905	334 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	LRCH3	Q96II8	777 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	PYM1	Q9BRP8	204 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	LLPH	Q9BRT6	129 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	TCHP	Q9BT92	498 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	MYL10	Q9BUA6	226 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	INCENP	Q9NQS7	918 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	KCNH7	Q9NS40	1196 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	RRN3	Q9NYV6	651 aa		5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CWC15	Q9P013	229 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	DDX25	Q9UHL0	483 aa	Known RBP	5.26	□□□□□ -1.57
KRIT1-222	ENST00000486261	CDY2A	Q9Y6F7	541 aa		5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms