RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 NTPCRQ9BSD7 190 aaKnown RBP13.91□□□□□ -0.18
SDHB-207ENST00000485515 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
SDHB-207ENST00000485515 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
SDHB-207ENST00000485515 MRPL4Q9BYD3 311 aaKnown RBP13.91□□□□□ -0.18
SDHB-207ENST00000485515 LRRC27Q9C0I9 530 aa13.91□□□□□ -0.18
SDHB-207ENST00000485515 ZHX3Q9H4I2 956 aa13.91□□□□□ -0.18
SDHB-207ENST00000485515 PARVGQ9HBI0 331 aa13.91□□□□□ -0.18
SDHB-207ENST00000485515 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
SDHB-207ENST00000485515 SLC16A4O15374 487 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.18
SDHB-207ENST00000485515 NR1I2O75469 434 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 OFD1O75665 1012 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 FGF18O76093 207 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 KRT85P78386 507 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 PKP1Q13835 747 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 AAK1Q2M2I8 961 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 DCAF4L1Q3SXM0 396 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 ATF7IP2Q5U623 682 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 KCNT2Q6UVM3 1135 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 DAW1Q8N136 415 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 MICAL1Q8TDZ2 1067 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
SDHB-207ENST00000485515 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 EIF2AQ9BY44 585 aaKnown RBP13.9□□□□□ -0.18
SDHB-207ENST00000485515 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
SDHB-207ENST00000485515 CWH43Q9H720 699 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
SDHB-207ENST00000485515 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 RNF19AQ9NV58 838 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 PARP2Q9UGN5 583 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
SDHB-207ENST00000485515 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 GRM6O15303 877 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 NCK2O43639 380 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 BRD1O95696 1058 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 ALDH2P05091 517 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 ITGB1P05556 798 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 LINC00271P0C7V0 271 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 AMPD3Q01432 767 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
SDHB-207ENST00000485515 MAPK7Q13164 816 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 ARSHQ5FYA8 562 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 PDE12Q6L8Q7 609 aaKnown RBP13.89□□□□□ -0.19
SDHB-207ENST00000485515 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 LRRC55Q6ZSA7 311 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 USP49Q70CQ1 688 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 CDR2LQ86X02 465 aaPredicted RBP13.89□□□□□ -0.19
SDHB-207ENST00000485515 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.19
SDHB-207ENST00000485515 SMG8Q8ND04 991 aaKnown RBP13.89□□□□□ -0.19
SDHB-207ENST00000485515 POF1BQ8WVV4 589 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 TMEM169Q96HH4 297 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 REEP2Q9BRK0 252 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 GBP3Q9H0R5 595 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 CUEDC2Q9H467 287 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 ARHGAP28Q9P2N2 729 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 THEGQ9P2T0 379 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 COG5Q9UP83 839 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 LZTS1Q9Y250 596 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 HES2Q9Y543 173 aa13.89□□□□□ -0.19
SDHB-207ENST00000485515 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
SDHB-207ENST00000485515 NPHP3-ACAD11A0A0J9YXS1 232 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 ARL5CA6NH57 179 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 TRAK2O60296 914 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 POMCP01189 267 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 MATR3P43243 847 aaKnown RBP eCLIP13.88□□□□□ -0.19
SDHB-207ENST00000485515 BCAR1P56945 870 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 NUCB2P80303 420 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 PLCB3Q01970 1234 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
SDHB-207ENST00000485515 GIT2Q14161 759 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 FAM178BQ8IXR5 827 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 PDILTQ8N807 584 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 IQUBQ8NA54 791 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 SPPL3Q8TCT6 385 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 BICD1Q96G01 975 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 SPATA32Q96LK8 384 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 NXF3Q9H4D5 531 aaKnown RBP13.88□□□□□ -0.19
SDHB-207ENST00000485515 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 TNFSF13BQ9Y275 285 aa13.88□□□□□ -0.19
SDHB-207ENST00000485515 ZMYM2Q9UBW7 1377 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 MEIS3P2A8K0S8 358 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 K7ENM7 598 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 CSPG5O95196 566 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 AKAP5P24588 427 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 MLH1P40692 756 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 YARSP54577 528 aaKnown RBP13.87□□□□□ -0.19
SDHB-207ENST00000485515 ZNF568Q3ZCX4 644 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
SDHB-207ENST00000485515 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms