RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 SORCS3Q9UPU3 1222 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 PCDHB2Q9Y5E7 798 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 CNTNAP2Q9UHC6 1331 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 FAM205CA6NFA0 338 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 B4GALT3O60512 393 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 ZNF623O75123 536 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 EPCAMP16422 314 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 TXKP42681 527 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 MTHFRP42898 656 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 KIAA1841Q6NSI8 718 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 DDX53Q86TM3 631 aaKnown RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 FERMT3Q86UX7 667 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 DIS3L2Q8IYB7 885 aaKnown RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 C12orf76Q8N812 135 aaPredicted RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 CNNM3Q8NE01 707 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 IGSF21Q96ID5 467 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 EIF2AK1Q9BQI3 630 aaKnown RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 VN1R3Q9BXE9 311 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 TRIM6Q9C030 488 aaPredicted RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 NRDE2Q9H7Z3 1164 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 UBN1Q9NPG3 1134 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 DZANK1Q9NVP4 752 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 WRAP73Q9P2S5 460 aaPredicted RBP14.75□□□□□ -0.05
UBA3-210ENST00000485424 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 STK39Q9UEW8 545 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 IRAK3Q9Y616 596 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 GVINP1Q7Z2Y8 2422 aa14.75□□□□□ -0.05
UBA3-210ENST00000485424 BTBD18B2RXH4 712 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 INO80B-WBP1J3KQ70 363 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 OFD1O75665 1012 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 LARGE1O95461 756 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 CTSAP10619 480 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 ITGA4P13612 1032 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 FDPSP14324 419 aaKnown RBP14.74□□□□□ -0.05
UBA3-210ENST00000485424 ATP2B1P20020 1258 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 AXLP30530 894 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 GNL2Q13823 731 aaKnown RBP14.74□□□□□ -0.05
UBA3-210ENST00000485424 PCBP1Q15365 356 aaKnown RBP eCLIP14.74□□□□□ -0.05
UBA3-210ENST00000485424 KANK3Q6NY19 840 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 UBALD2Q8IYN6 164 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 HACE1Q8IYU2 909 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 NSUN7Q8NE18 718 aaKnown RBP14.74□□□□□ -0.05
UBA3-210ENST00000485424 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 NOTCH4Q99466 2003 aa14.74□□□□□ -0.05
UBA3-210ENST00000485424 DGAT1O75907 488 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 ALDH2P05091 517 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 ASGR2P07307 311 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 GALTP07902 379 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 NOTUMQ6P988 496 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 PPFIBP1Q86W92 1011 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 TDRD5Q8NAT2 981 aaKnown RBP14.73□□□□□ -0.05
UBA3-210ENST00000485424 SLC22A17Q8WUG5 538 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 EMILIN2Q9BXX0 1053 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 ANKEF1Q9NU02 776 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 FAN1Q9Y2M0 1017 aa14.73□□□□□ -0.05
UBA3-210ENST00000485424 CACNA1IQ9P0X4 2223 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 ZBTB39O15060 712 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 ST18O60284 1047 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 GFRA3O60609 400 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 JAK2O60674 1132 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 NR1I2O75469 434 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 SLITRK3O94933 977 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 POMCP01189 267 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 NCLP19338 710 aaKnown RBP14.72□□□□□ -0.05
UBA3-210ENST00000485424 SLC11A1P49279 550 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 SPIRE1Q08AE8 756 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 PTPN14Q15678 1187 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 AGMOQ6ZNB7 445 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 ZNF280BQ86YH2 543 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 ZDHHC14Q8IZN3 488 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 ATOH1Q92858 354 aaPredicted RBP14.72□□□□□ -0.05
UBA3-210ENST00000485424 TNFRSF25Q93038 417 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 TMEM175Q9BSA9 504 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 MINDY3Q9H8M7 445 aa14.72□□□□□ -0.05
UBA3-210ENST00000485424 DBR1Q9UK59 544 aaKnown RBP14.72□□□□□ -0.05
UBA3-210ENST00000485424 H0Y858 1186 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 SSBP05455 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBA3-210ENST00000485424 MCM7P33993 719 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 NUBP1P53384 320 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 GUCY1B3Q02153 619 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 TMEM132AQ24JP5 1023 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 TMC5Q6UXY8 1006 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 MRPL10Q7Z7H8 261 aaKnown RBP14.71□□□□□ -0.05
UBA3-210ENST00000485424 CABP7Q86V35 215 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 TMEM105Q8N8V8 129 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 FAM184AQ8NB25 1140 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 ERMNQ8TAM6 284 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 CCDC51Q96ER9 411 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 CPB2Q96IY4 423 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 C8orf76Q96K31 380 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 APOL6Q9BWW8 343 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 SFXN1Q9H9B4 322 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 USTQ9Y2C2 406 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 SSX2IPQ9Y2D8 614 aa14.71□□□□□ -0.05
UBA3-210ENST00000485424 USO1O60763 962 aaKnown RBP14.7□□□□□ -0.06
UBA3-210ENST00000485424 DDHD2O94830 711 aa14.7□□□□□ -0.06
UBA3-210ENST00000485424 LYPLA2O95372 231 aa14.7□□□□□ -0.06
UBA3-210ENST00000485424 KLRC2P26717 231 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms