RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 FANCCQ00597 558 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 CCDC173Q0VFZ6 552 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 CAPSQ13938 189 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 KCNJ12Q14500 433 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 NBPF20Q3BBV1 942 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 TCP11X2Q5H9J9 407 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 MARCH8Q5T0T0 291 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 APBB1IPQ7Z5R6 666 aaPredicted RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 SRGAP1Q7Z6B7 1085 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 FRMD5Q7Z6J6 570 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 USP37Q86T82 979 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 IFNLR1Q8IU57 520 aaPredicted RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 ZC3H3Q8IXZ2 948 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 GLIS3Q8NEA6 775 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 TRAPPC12Q8WVT3 735 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 BSNDQ8WZ55 320 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 SCLT1Q96NL6 688 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 MED15Q96RN5 788 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 MKNK1Q9BUB5 465 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 MRPL4Q9BYD3 311 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 FGFBP2Q9BYJ0 223 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 KIAA1586Q9HCI6 787 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 AGPAT3Q9NRZ7 376 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 SAMSN1Q9NSI8 373 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 TMEM39AQ9NV64 488 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 PRMT7Q9NVM4 692 aaPredicted RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 LIMA1Q9UHB6 759 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 TRANK1O15050 2925 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 M0QZ92 97 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 HNRNPDLO14979 420 aaKnown RBP15.28■□□□□ 0.04
SMAD9-204ENST00000483941 PIGRP01833 764 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 GARTP22102 1010 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
SMAD9-204ENST00000483941 LIG4P49917 911 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 CLCN3P51790 818 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 ADAM17P78536 824 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
SMAD9-204ENST00000483941 CCDC40Q4G0X9 1142 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 ZPBP2Q6X784 338 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 CREBRFQ8IUR6 639 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 KIAA0319LQ8IZA0 1049 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 ADAMTS19Q8TE59 1207 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 PPM1EQ8WY54 764 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 MRFAP1L1Q96HT8 127 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 PRIMPOLQ96LW4 560 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 GCOM2Q9BZD3 368 aaPredicted RBP15.28■□□□□ 0.04
SMAD9-204ENST00000483941 HDAC6Q9UBN7 1215 aa15.28■□□□□ 0.04
SMAD9-204ENST00000483941 ARID2Q68CP9 1835 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 MAPK13O15264 365 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 ADCY5O95622 1261 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 LDHAP00338 332 aaKnown RBP15.27■□□□□ 0.04
SMAD9-204ENST00000483941 CDC25BP30305 580 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 HOXD13P35453 343 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 MTIF2P46199 727 aaKnown RBP15.27■□□□□ 0.04
SMAD9-204ENST00000483941 MARSP56192 900 aaKnown RBP15.27■□□□□ 0.04
SMAD9-204ENST00000483941 FAM187BQ17R55 369 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 ARMCX5Q6P1M9 558 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 RPAINQ86UA6 219 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 NLRP7Q8WX94 980 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 FAM122AQ96E09 287 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 ASB2Q96Q27 587 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.04
SMAD9-204ENST00000483941 MYH11P35749 1972 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 A0A0U1RQG5 324 aaPredicted RBP15.26■□□□□ 0.03
SMAD9-204ENST00000483941 INO80B-WBP1J3KQ70 363 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 ACKR2O00590 384 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 N4BP3O15049 544 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 EXOC3O60645 756 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 CAND2O75155 1236 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 GPC3P51654 580 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 ZNF75DP51815 510 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 ENPEPQ07075 957 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 DRP2Q13474 957 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 ITGA7Q13683 1181 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 ANKRD33Q7Z3H0 272 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 XXYLT1Q8NBI6 393 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 CNOT6LQ96LI5 555 aaKnown RBP15.26■□□□□ 0.03
SMAD9-204ENST00000483941 UHRF1Q96T88 793 aaPredicted RBP15.26■□□□□ 0.03
SMAD9-204ENST00000483941 KIFC3Q9BVG8 833 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 FZD8Q9H461 694 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 STARD7Q9NQZ5 370 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 DMAC2Q9NW81 257 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 IFNKQ9P0W0 207 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 ARMCX3Q9UH62 379 aaPredicted RBP15.26■□□□□ 0.03
SMAD9-204ENST00000483941 NOD1Q9Y239 953 aa15.26■□□□□ 0.03
SMAD9-204ENST00000483941 DCDC2CA8MYV0 355 aa15.25■□□□□ 0.03
SMAD9-204ENST00000483941 PRKCBP05771 671 aa15.25■□□□□ 0.03
SMAD9-204ENST00000483941 ATP1A3P13637 1013 aa15.25■□□□□ 0.03
SMAD9-204ENST00000483941 KRT13P13646 458 aa15.25■□□□□ 0.03
SMAD9-204ENST00000483941 NLRP11P59045 1033 aaKnown RBP15.25■□□□□ 0.03
SMAD9-204ENST00000483941 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms