RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PPARAQ07869 468 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 VPS50Q96JG6 964 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 DHX36Q9H2U1 1008 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 SPDYE2BA6NHP3 402 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 RAD51BO15315 384 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 KLHL41O60662 606 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 KLHL18O94889 574 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 MYL1P05976 194 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 SPDYE6P0CI01 402 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 PDIA2Q13087 525 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 MAPRE1Q15691 268 aaKnown RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 ZNF618Q5T7W0 954 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 C1orf50Q9BV19 199 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 HMG20AQ9NP66 347 aa10.84□□□□□ -0.67
COL12A1-207ENST00000483888 POLR1AO95602 1720 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-207ENST00000483888 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.67
COL12A1-207ENST00000483888 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 EIF2S1P05198 315 aaKnown RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 FBLN1P23142 703 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 KCTD17Q8N5Z5 321 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 KCNH5Q8NCM2 988 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 GIPC3Q8TF64 312 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 EPS8L2Q9H6S3 715 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 MIF4GDA9UHW6 222 aaKnown RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CCDC130P13994 396 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 TMEM79Q9BSE2 394 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 RRN3Q9NYV6 651 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 SMCO2A6NFE2 343 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CCDC127Q96BQ5 260 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 ZNF184Q99676 751 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 SNAPC4Q5SXM2 1469 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 LRRC53A6NM62 1247 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 OATP04181 439 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 FUKQ8N0W3 1084 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 TULP2O00295 520 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 RASGRF1Q13972 1273 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 TBCCQ15814 346 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 MED23Q9ULK4 1368 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 ANGPT2O15123 496 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 NR1D2Q14995 579 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 G2E3Q7L622 706 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 DBNDD2Q9BQY9 259 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 ZFYVE1Q9HBF4 777 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 SELENONQ9NZV5 590 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 COMMD3-BMI1R4GMX3 469 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 USP19O94966 1318 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 TRIM43BA6NCK2 446 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 HSD17B3P37058 310 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 GRIP2Q9C0E4 1043 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 RUBCNLQ9H714 662 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 IARS2Q9NSE4 1012 aaKnown RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CEP72Q9P209 647 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 DDX25Q9UHL0 483 aaKnown RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 C6orf229H3BNL8 230 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 RNF103O00237 685 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CDH16O75309 829 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 ZBED1O96006 694 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 COPAP53621 1224 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CCDC153Q494R4 210 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 ATG14Q6ZNE5 492 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 C4orf50Q6ZRC1 276 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CCNYL1Q8N7R7 359 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 CCNYQ8ND76 341 aa10.83□□□□□ -0.68
COL12A1-207ENST00000483888 TRIM45Q9H8W5 580 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 RBM12Q9NTZ6 932 aaKnown RBP10.83□□□□□ -0.68
COL12A1-207ENST00000483888 GAPVD1Q14C86 1478 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 LIN7AO14910 233 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 GGPS1O95749 300 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 KRT27Q7Z3Y8 459 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 ELF3P78545 371 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 TRIP4Q15650 581 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 TUBA3EQ6PEY2 450 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 HPS1Q92902 700 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 SMNDC1O75940 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 PGM3O95394 542 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 SLC34A1Q06495 639 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 LRRC41Q15345 812 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 CLVS1Q8IUQ0 354 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 LARP4BQ92615 738 aaKnown RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 VTI1AQ96AJ9 217 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 L2HGDHQ9H9P8 463 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 RABL2AQ9UBK7 228 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 MAP3K5Q99683 1374 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 NEMP1O14524 444 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 TOMM70O94826 608 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 DNAJC3Q13217 504 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 MLPHQ9BV36 600 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 APOL6Q9BWW8 343 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 SRPRBQ9Y5M8 271 aaKnown RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 EPRSP07814 1512 aaKnown RBP10.82□□□□□ -0.68
COL12A1-207ENST00000483888 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 COG2Q14746 738 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 WASHC2DQ5SRD0 308 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
COL12A1-207ENST00000483888 SNX2O60749 519 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms