RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ST13P5Q8NFI4 369 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 PSPC1Q8WXF1 523 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 RIN2Q8WYP3 895 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SMG7Q92540 1137 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 STAMQ92783 540 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 KCNB2Q92953 911 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 CEP170P1Q96L14 293 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 GAD1Q99259 594 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 HERC2P3Q9BVR0 1158 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 C22orf23Q9BZE7 217 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 TBC1D17Q9HA65 648 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SH3GLB2Q9NR46 395 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 MARCH5Q9NX47 278 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 DPP7Q9UHL4 492 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SSX2IPQ9Y2D8 614 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SNX14Q9Y5W7 946 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 R4GN57 208 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 CNTNAP2Q9UHC6 1331 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 NID2Q14112 1375 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 MYO15AQ9UKN7 3530 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 F8W810 466 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 CDC45O75419 566 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 DCNP07585 359 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 SRFP11831 508 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 ITGA4P13612 1032 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 RPS6KB1P23443 525 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 GLUD2P49448 558 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 SSRP1Q08945 709 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 LAMTOR4Q0VGL1 99 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 ELMSAN1Q6PJG2 1045 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 CYP26C1Q6V0L0 522 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 PALB2Q86YC2 1186 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 COLGALT2Q8IYK4 626 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 KIAA2013Q8IYS2 634 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 BLIDQ8IZY5 108 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 FBXL16Q8N461 479 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 RNF149Q8NC42 400 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 SMG8Q8ND04 991 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 CNNM3Q8NE01 707 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 NXPE3Q969Y0 559 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 ZNF707Q96C28 371 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 RMDN1Q96DB5 314 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 B3GALT6Q96L58 329 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 MBOAT7Q96N66 472 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 EIF2AQ9BY44 585 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 AGXT2Q9BYV1 514 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 RHOBTB2Q9BYZ6 727 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 SEMA4AQ9H3S1 761 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 DHX33Q9H6R0 707 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 PIDD1Q9HB75 910 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 RXFP1Q9HBX9 757 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 UBN1Q9NPG3 1134 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 BMP2KQ9NSY1 1161 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 MIOSQ9NXC5 875 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 WRAP73Q9P2S5 460 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 EPS15L1Q9UBC2 864 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 DDX25Q9UHL0 483 aaKnown RBP8.25□□□□□ -1.09
CSDE1-206ENST00000483030 SIT1Q9Y3P8 196 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 HES2Q9Y543 173 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 IPPQ9Y573 584 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 CLUHO75153 1309 aa8.25□□□□□ -1.09
CSDE1-206ENST00000483030 GVINP1Q7Z2Y8 2422 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 ARL5CA6NH57 179 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 M0R2N6 131 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 ZBTB39O15060 712 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 ASAP2O43150 1006 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 SLC37A4O43826 429 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 DKC1O60832 514 aaKnown RBP eCLIP8.24□□□□□ -1.09
CSDE1-206ENST00000483030 NR1I2O75469 434 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 ERLIN2O94905 339 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 EFEMP2O95967 443 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 LAMP2P13473 410 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
CSDE1-206ENST00000483030 HSPA4P34932 840 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 MLH1P40692 756 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 RFC5P40937 340 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 SCNN1GP51170 649 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 EVCP57679 992 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 DSG1Q02413 1049 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 DSC1Q08554 894 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 PPP2R5CQ13362 524 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 INF2Q27J81 1249 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 MOXD1Q6UVY6 613 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 FERMT3Q86UX7 667 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 GLYCTKQ8IVS8 523 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 EXOC8Q8IYI6 725 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 TRIM22Q8IYM9 498 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 RNF168Q8IYW5 571 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-206ENST00000483030 GPR152Q8TDT2 470 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 TCP11Q8WWU5 503 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 CPB2Q96IY4 423 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 FAM20AQ96MK3 541 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 ZFP42Q96MM3 310 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 AIFM3Q96NN9 605 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 LARP6Q9BRS8 491 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms