RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, human

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS13D-208	ENST00000481484	ZSCAN20	P17040	1043 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	EIF4B	P23588	611 aa	Known RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CYP3A7	P24462	503 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	ABL2	P42684	1182 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NDUFV1	P49821	464 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	GPC3	P51654	580 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NLRP5	P59047	1200 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	VAC14	Q08AM6	782 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	ORC2	Q13416	577 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	GIT2	Q14161	759 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NTRK3	Q16288	839 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	XKR3	Q5GH77	459 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	SPOUT1	Q5T280	376 aa	Known RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	ELMSAN1	Q6PJG2	1045 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	MIER3	Q7Z3K6	550 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CYP2U1	Q7Z449	544 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NEK8	Q86SG6	692 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	FAM228A	Q86W67	206 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	THNSL1	Q8IYQ7	743 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	KIAA0319L	Q8IZA0	1049 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	BLID	Q8IZY5	108 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	METTL13	Q8N6R0	699 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CYP2W1	Q8TAV3	490 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	TRAPPC12	Q8WVT3	735 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	SLC7A3	Q8WY07	619 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	PHKB	Q93100	1093 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	FAM20A	Q96MK3	541 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CCDC43	Q96MW1	224 aa	Known RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	MBOAT7	Q96N66	472 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	ZNF558	Q96NG5	402 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NECTIN4	Q96NY8	510 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NECAB3	Q96P71	396 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	OSMR	Q99650	979 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	ADAM2	Q99965	735 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NGRN	Q9NPE2	291 aa	Known RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CHST12	Q9NRB3	414 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	NRBP2	Q9NSY0	501 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	DZANK1	Q9NVP4	752 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	TMEM260	Q9NX78	707 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	VPS54	Q9P1Q0	977 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	GABBR1	Q9UBS5	961 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	PUF60	Q9UHX1	559 aa	Known RBP	4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	ST3GAL5	Q9UNP4	418 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	PLAGL2	Q9UPG8	496 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	PCDHB7	Q9Y5E2	793 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CNTNAP2	Q9UHC6	1331 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	MYO10	Q9HD67	2058 aa		4.65	□□□□□ -1.67
VPS13D-208	ENST00000481484	CFAP54	Q96N23	3096 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484		A0A0U1RQF3	1178 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	TBKBP1	A7MCY6	615 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484		H3BQ06	376 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484		M0R2N6	131 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	MEN1	O00255	615 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	FSCN2	O14926	492 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	GRM6	O15303	877 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	MBTPS2	O43462	519 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	GPR32	O75388	356 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PSMD10	O75832	226 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	FGF18	O76093	207 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	IL9	P15248	144 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	HOXB8	P17481	243 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PDIA3	P30101	505 aa	Known RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	CLCN3	P51790	818 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	POLG	P54098	1239 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PSMC5	P62195	406 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	FAM189B	P81408	668 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PLCB3	Q01970	1234 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	KRT17	Q04695	432 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	TMEM62	Q0P6H9	643 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	HYAL1	Q12794	435 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	USP4	Q13107	963 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PPP2R5C	Q13362	524 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	COL9A3	Q14050	684 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	TOB2	Q14106	344 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	DSC3	Q14574	896 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	SMC1A	Q14683	1233 aa	Known RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	CBX2	Q14781	532 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	TARBP2	Q15633	366 aa	Known RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	DUSP6	Q16828	381 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	KIZ	Q2M2Z5	673 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PAN2	Q504Q3	1202 aa	Known RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	WDR44	Q5JSH3	913 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PPP4R3A	Q6IN85	833 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	SWSAP1	Q6NVH7	229 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	EFCAB12	Q6NXP0	572 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	GLB1L	Q6UWU2	654 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	B3GNT9	Q6UX72	402 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	PRICKLE2	Q7Z3G6	844 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	ECHDC2	Q86YB7	292 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	SLFN12	Q8IYM2	578 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	HACE1	Q8IYU2	909 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	KLHL23	Q8NBE8	558 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	COLGALT1	Q8NBJ5	622 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	ETNPPL	Q8TBG4	499 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	SPPL3	Q8TCT6	385 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	TBCK	Q8TEA7	893 aa		4.64	□□□□□ -1.67
VPS13D-208	ENST00000481484	POF1B	Q8WVV4	589 aa		4.64	□□□□□ -1.67

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