RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
CUL3-209ENST00000481135 OBP2AQ9NY56 170 aa11.24□□□□□ -0.61
CUL3-209ENST00000481135 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
CUL3-209ENST00000481135 NR2E1Q9Y466 385 aa11.24□□□□□ -0.61
CUL3-209ENST00000481135 CFAP20Q9Y6A4 193 aaKnown RBP11.24□□□□□ -0.61
CUL3-209ENST00000481135 NRP1O14786 923 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 BPIFB4P59827 614 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 NFYCQ13952 458 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 PGS1Q32NB8 556 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
CUL3-209ENST00000481135 PLEKHH3Q7Z736 793 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 MARCH10Q8NA82 808 aaPredicted RBP11.23□□□□□ -0.61
CUL3-209ENST00000481135 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
CUL3-209ENST00000481135 C1GALT1C1Q96EU7 318 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
CUL3-209ENST00000481135 CTNND1O60716 968 aaKnown RBP11.22□□□□□ -0.61
CUL3-209ENST00000481135 TOX4O94842 621 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 GASTP01350 101 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 VSIG10L2P0DP72 767 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 GNALP38405 381 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 DGKHQ86XP1 1220 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 UHRF1Q96T88 793 aaPredicted RBP11.22□□□□□ -0.61
CUL3-209ENST00000481135 BCO1Q9HAY6 547 aa11.22□□□□□ -0.61
CUL3-209ENST00000481135 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
CUL3-209ENST00000481135 GYPEP15421 78 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 EDNRBP24530 442 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 ATP2C1P98194 919 aaPredicted RBP11.21□□□□□ -0.61
CUL3-209ENST00000481135 DUSP2Q05923 314 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 THEMIS2Q5TEJ8 643 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 B3GNT9Q6UX72 402 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 TTC7BQ86TV6 843 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 RHOT1Q8IXI2 618 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 OR14K1Q8NGZ2 314 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 ZSCAN18Q8TBC5 510 aaPredicted RBP11.21□□□□□ -0.61
CUL3-209ENST00000481135 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
CUL3-209ENST00000481135 CYFIP2Q96F07 1278 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 TAAR9Q96RI9 348 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 ING3Q9NXR8 418 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
CUL3-209ENST00000481135 B4GALT4O60513 344 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 C8AP07357 584 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 CRHR1P34998 444 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 ADCY7P51828 1080 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 ZNF267Q14586 743 aaPredicted RBP11.2□□□□□ -0.62
CUL3-209ENST00000481135 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
CUL3-209ENST00000481135 CAMKK1Q8N5S9 505 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 MSL3Q8N5Y2 521 aaKnown RBP11.2□□□□□ -0.62
CUL3-209ENST00000481135 ANKRD53Q8N9V6 530 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 OR7D4Q8NG98 312 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 KMT5AQ9NQR1 393 aa11.2□□□□□ -0.62
CUL3-209ENST00000481135 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
CUL3-209ENST00000481135 PUF60Q9UHX1 559 aaKnown RBP11.2□□□□□ -0.62
CUL3-209ENST00000481135 SGTAO43765 313 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 GBX1Q14549 363 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 SLC4A10Q6U841 1118 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 LGI4Q8N135 537 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 FAM193BQ96PV7 902 aaPredicted RBP11.19□□□□□ -0.62
CUL3-209ENST00000481135 TDP1Q9NUW8 608 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 GPRC5DQ9NZD1 345 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 GABBR1Q9UBS5 961 aa11.19□□□□□ -0.62
CUL3-209ENST00000481135 NOBOXO60393 691 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 RAC3P60763 192 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 HGFACQ04756 655 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 SEPT2Q15019 361 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 SURF1Q15526 300 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 NT5DC1Q5TFE4 455 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 PDZD4Q76G19 769 aaPredicted RBP11.18□□□□□ -0.62
CUL3-209ENST00000481135 DRC7Q8IY82 874 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 LRRC56Q8IYG6 542 aaPredicted RBP11.18□□□□□ -0.62
CUL3-209ENST00000481135 PQLC1Q8N2U9 271 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 OR2I1PQ8NGU4 316 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 RABGGTAQ92696 567 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 HOXB13Q92826 284 aaPredicted RBP11.18□□□□□ -0.62
CUL3-209ENST00000481135 MSL2Q9HCI7 577 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 PCDHA13Q9Y5I0 950 aa11.18□□□□□ -0.62
CUL3-209ENST00000481135 PMS2P1A4D2B8 440 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 SLC16A6O15403 523 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 IL10RAQ13651 578 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 TBR1Q16650 682 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 Q6ZVL8 140 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 RSPH3Q86UC2 560 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 CCDC146Q8IYE0 955 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 RPL10LQ96L21 214 aaKnown RBP11.17□□□□□ -0.62
CUL3-209ENST00000481135 LANCL2Q9NS86 450 aa11.17□□□□□ -0.62
CUL3-209ENST00000481135 H3BML4 177 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 IL12RB1P42701 662 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 CDC42EP1Q00587 391 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 ARHGEF18Q6ZSZ5 1173 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 DENND1CQ8IV53 801 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 CMTM4Q8IZR5 234 aa11.16□□□□□ -0.62
CUL3-209ENST00000481135 CDC5LQ99459 802 aaKnown RBP11.16□□□□□ -0.62
CUL3-209ENST00000481135 ACO2Q99798 780 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms