RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ACAD10Q6JQN1 1059 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 LIN54Q6MZP7 749 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 TATDN1Q6P1N9 297 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 SESTD1Q86VW0 696 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 CXorf67Q86X51 503 aaPredicted RBP9.02□□□□□ -0.96
LSM5-210ENST00000480956 CCDC103Q8IW40 242 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 RTKN2Q8IZC4 609 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 FANCBQ8NB91 859 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 RUFY2Q8WXA3 655 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 AUTS2Q8WXX7 1259 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 PDCD2LQ9BRP1 358 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 DSCC1Q9BVC3 393 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 SAYSD1Q9NPB0 183 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 GJB4Q9NTQ9 266 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 USP36Q9P275 1121 aaKnown RBP9.02□□□□□ -0.96
LSM5-210ENST00000480956 MYO1AQ9UBC5 1043 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 SRP68Q9UHB9 627 aaKnown RBP9.02□□□□□ -0.96
LSM5-210ENST00000480956 RPS6KA6Q9UK32 745 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 PCDHGB5Q9Y5G0 923 aa9.02□□□□□ -0.96
LSM5-210ENST00000480956 A0A1W2PPL8 197 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 ISM1B1AKI9 464 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.02□□□□□ -0.97
LSM5-210ENST00000480956 STXBP3O00186 592 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 PTP4A3O75365 173 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 TMEM63AO94886 807 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 FGFR2P21802 821 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 GRK3P35626 688 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 AFMP43652 599 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 WTAPQ15007 396 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 PRAMEF13Q5VWM6 474 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 SULT6B1Q6IMI4 303 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 ESRP1Q6NXG1 681 aaKnown RBP9.02□□□□□ -0.97
LSM5-210ENST00000480956 CNKSR3Q6P9H4 555 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 CNSTQ6PJW8 725 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 HERC6Q8IVU3 1022 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 CEP70Q8NHQ1 597 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 FAM71BQ8TC56 605 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 CFAP53Q96M91 514 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 SPON1Q9HCB6 807 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 CCDC177Q9NQR7 707 aaPredicted RBP9.02□□□□□ -0.97
LSM5-210ENST00000480956 AGTPBP1Q9UPW5 1226 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 BACE2Q9Y5Z0 518 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 IKBKGQ9Y6K9 419 aa9.02□□□□□ -0.97
LSM5-210ENST00000480956 ZCCHC6Q5VYS8 1495 aaKnown RBP9.02□□□□□ -0.97
LSM5-210ENST00000480956 TDRD9Q8NDG6 1382 aaKnown RBP9.01□□□□□ -0.97
LSM5-210ENST00000480956 ARNTLO00327 626 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 SLC4A1P02730 911 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 CTSBP07858 339 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 RARBP10826 455 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 CPB1P15086 417 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 ATP5DP30049 168 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 SLC7A1P30825 629 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 STAT5AP42229 794 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 PHKA1P46020 1223 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 IFI35P80217 286 aaPredicted RBP9.01□□□□□ -0.97
LSM5-210ENST00000480956 C19orf57Q0VDD7 668 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 SLMAPQ14BN4 828 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 MUM1Q2TAK8 710 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 C3orf36Q3SXR2 165 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 ODF2Q5BJF6 829 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 CHD1LQ86WJ1 897 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 TTLL11Q8NHH1 800 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 LILRB1Q8NHL6 650 aaPredicted RBP9.01□□□□□ -0.97
LSM5-210ENST00000480956 GOT1L1Q8NHS2 421 aaPredicted RBP9.01□□□□□ -0.97
LSM5-210ENST00000480956 ASIC4Q96FT7 647 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 RAX2Q96IS3 184 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 KREMEN1Q96MU8 473 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 EYA3Q99504 573 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 UBE2OQ9C0C9 1292 aaKnown RBP9.01□□□□□ -0.97
LSM5-210ENST00000480956 TMEM160Q9NX00 188 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 BLOC1S6Q9UL45 172 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 PCDHGC5Q9Y5F6 944 aa9.01□□□□□ -0.97
LSM5-210ENST00000480956 ZFP37Q9Y6Q3 630 aaPredicted RBP9.01□□□□□ -0.97
LSM5-210ENST00000480956 hCG_1807616A0A1W2PRN6 198 aa9□□□□□ -0.97
LSM5-210ENST00000480956 ZNF561-AS1K7EIQ3 104 aa9□□□□□ -0.97
LSM5-210ENST00000480956 AP3D1O14617 1153 aa9□□□□□ -0.97
LSM5-210ENST00000480956 KRT15P19012 456 aa9□□□□□ -0.97
LSM5-210ENST00000480956 CDC25BP30305 580 aa9□□□□□ -0.97
LSM5-210ENST00000480956 HNF4AP41235 474 aa9□□□□□ -0.97
LSM5-210ENST00000480956 MANFP55145 182 aaKnown RBP9□□□□□ -0.97
LSM5-210ENST00000480956 POU4F1Q01851 419 aa9□□□□□ -0.97
LSM5-210ENST00000480956 DUSP4Q13115 394 aa9□□□□□ -0.97
LSM5-210ENST00000480956 MOGSQ13724 837 aa9□□□□□ -0.97
LSM5-210ENST00000480956 KAZNQ674X7 775 aa9□□□□□ -0.97
LSM5-210ENST00000480956 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
LSM5-210ENST00000480956 ABRAXAS1Q6UWZ7 409 aa9□□□□□ -0.97
LSM5-210ENST00000480956 FAM35AQ86V20 835 aa9□□□□□ -0.97
LSM5-210ENST00000480956 RPAP2Q8IXW5 612 aaPredicted RBP9□□□□□ -0.97
LSM5-210ENST00000480956 NGEFQ8N5V2 710 aa9□□□□□ -0.97
LSM5-210ENST00000480956 RTF1Q92541 710 aaKnown RBP9□□□□□ -0.97
LSM5-210ENST00000480956 VWCEQ96DN2 955 aa9□□□□□ -0.97
LSM5-210ENST00000480956 MTFMTQ96DP5 389 aaKnown RBP9□□□□□ -0.97
LSM5-210ENST00000480956 MSLNLQ96KJ4 702 aa9□□□□□ -0.97
LSM5-210ENST00000480956 BRIP1Q9BX63 1249 aa9□□□□□ -0.97
LSM5-210ENST00000480956 SMURF1Q9HCE7 757 aa9□□□□□ -0.97
LSM5-210ENST00000480956 ACSS2Q9NR19 701 aa9□□□□□ -0.97
LSM5-210ENST00000480956 PRR13Q9NZ81 148 aa9□□□□□ -0.97
LSM5-210ENST00000480956 RASAL2Q9UJF2 1139 aa9□□□□□ -0.97
LSM5-210ENST00000480956 SNX8Q9Y5X2 465 aa9□□□□□ -0.97
LSM5-210ENST00000480956 CYP17A1P05093 508 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms