RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 STBD1O95210 358 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 SSBP05455 408 aaKnown RBP eCLIP7.89□□□□□ -1.15
COL17A1-205ENST00000480127 LIG1P18858 919 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 RFX1P22670 979 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 RFC5P40937 340 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 AFF1P51825 1210 aaKnown RBP7.89□□□□□ -1.15
COL17A1-205ENST00000480127 NPEPPSP55786 919 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 SCRN1Q12765 414 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 MOXD1Q6UVY6 613 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 AGMOQ6ZNB7 445 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 SLC44A3Q8N4M1 653 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 NECAB1Q8N987 351 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 RIN2Q8WYP3 895 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-205ENST00000480127 TMEM143Q96AN5 459 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 MYADMQ96S97 322 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 APOL6Q9BWW8 343 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 EMILIN2Q9BXX0 1053 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 NIFKQ9BYG3 293 aaKnown RBP7.89□□□□□ -1.15
COL17A1-205ENST00000480127 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 RHOBTB2Q9BYZ6 727 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 TBC1D17Q9HA65 648 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 WDR6Q9NNW5 1121 aaKnown RBP7.89□□□□□ -1.15
COL17A1-205ENST00000480127 DLGAP2Q9P1A6 1054 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 EPS15L1Q9UBC2 864 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 STK36Q9NRP7 1315 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 CYP3A7-CYP3A51PA0A087WV96 503 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 CCDC195A0A1B0GUA6 201 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 STK25O00506 426 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 GAS2O43903 313 aaKnown RBP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 NEMFO60524 1076 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 PFKFB2O60825 505 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 EFEMP2O95967 443 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 DCNP07585 359 aaKnown RBP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 SP9P0CG40 484 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 SRFP11831 508 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 CYP3A7P24462 503 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 YWHABP31946 246 aaKnown RBP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 TXKP42681 527 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 AK2P54819 239 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 EVCP57679 992 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 ANAPC15P60006 121 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 CTTNQ14247 550 aaKnown RBP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 PUM1Q14671 1186 aaKnown RBP eCLIP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 EMC2Q15006 297 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 POTEGQ6S5H5 508 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 TAS1R1Q7RTX1 841 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 KSR1Q8IVT5 923 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 DCLK2Q8N568 766 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 RNF149Q8NC42 400 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 ERMNQ8TAM6 284 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 ETNPPLQ8TBG4 499 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 GPR152Q8TDT2 470 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 PRPF31Q8WWY3 499 aaKnown RBP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 DYDC2Q96IM9 177 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 MTRQ99707 1265 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 PHF20Q9BVI0 1012 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 MAN1C1Q9NR34 630 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 MRPL17Q9NRX2 175 aaKnown RBP7.88□□□□□ -1.15
COL17A1-205ENST00000480127 MARCH5Q9NX47 278 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 DLL3Q9NYJ7 618 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 STK39Q9UEW8 545 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 TPCN1Q9ULQ1 816 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 CA14Q9ULX7 337 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 PCDHA12Q9UN75 941 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 C2orf16Q68DN1 1984 aa7.88□□□□□ -1.15
COL17A1-205ENST00000480127 CLUHO75153 1309 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 VPS13AQ96RL7 3174 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 EP300Q09472 2414 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 POTEMA6NI47 508 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 LRRIQ4A6NIV6 560 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 C2CD2LO14523 706 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 NRP1O14786 923 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 TBX3O15119 743 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 INPPL1O15357 1258 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 TEX28O15482 410 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 DTNBO60941 627 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 RFPL2O75678 378 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 PAPLNO95428 1278 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 SOD2P04179 222 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 ALDH2P05091 517 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 URODP06132 367 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 ITGA4P13612 1032 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 GLULP15104 373 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 GBP2P32456 591 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 MCM7P33993 719 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 LAMTOR4Q0VGL1 99 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 PPP2R5CQ13362 524 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 MXD4Q14582 209 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 EPHA7Q15375 998 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 SPECC1Q5M775 1068 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 KIAA0319Q5VV43 1072 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 CYP26C1Q6V0L0 522 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 MAEAQ7L5Y9 396 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 SRGAP1Q7Z6B7 1085 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 MRPL10Q7Z7H8 261 aaKnown RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 C1orf210Q8IVY1 113 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 DIS3L2Q8IYB7 885 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms