RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 AKT3Q9Y243 479 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 FAN1Q9Y2M0 1017 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 RAI2Q9Y5P3 530 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 UBIAD1Q9Y5Z9 338 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 PIAS3Q9Y6X2 628 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 EVPLQ92817 2033 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 CCL16O15467 120 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 C1RP00736 705 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
USP11-208ENST00000480104 AFF1P51825 1210 aaKnown RBP13.53□□□□□ -0.24
USP11-208ENST00000480104 DSG1Q02413 1049 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 TANGO2Q6ICL3 276 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
USP11-208ENST00000480104 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 B3GALT6Q96L58 329 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
USP11-208ENST00000480104 TMEM175Q9BSA9 504 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 POLIQ9UNA4 740 aa13.53□□□□□ -0.24
USP11-208ENST00000480104 ANKRD17O75179 2603 aaKnown RBP13.53□□□□□ -0.24
USP11-208ENST00000480104 SPAARA0A1B0GVQ0 90 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 BACH1O14867 736 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 CSDE1O75534 798 aaKnown RBP13.52□□□□□ -0.25
USP11-208ENST00000480104 ALDH2P05091 517 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 CCDC192P0DO97 292 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 RPL17P18621 184 aaKnown RBP13.52□□□□□ -0.25
USP11-208ENST00000480104 PXNP49023 591 aaPredicted RBP13.52□□□□□ -0.25
USP11-208ENST00000480104 CCDC178Q5BJE1 867 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 SCLT1Q96NL6 688 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 MAP7D2Q96T17 732 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 TMEM9BQ9NQ34 198 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 JADE2Q9NQC1 790 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 RAXQ9Y2V3 346 aa13.52□□□□□ -0.25
USP11-208ENST00000480104 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.25
USP11-208ENST00000480104 ASCC3Q8N3C0 2202 aaKnown RBP13.52□□□□□ -0.25
USP11-208ENST00000480104 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 FAM221BA6H8Z2 402 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 F8W810 466 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 MEIS2O14770 477 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 ARHGAP6O43182 974 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 EFEMP2O95967 443 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
USP11-208ENST00000480104 CCNE1P24864 410 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 LRRC32Q14392 662 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 TWF2Q6IBS0 349 aaKnown RBP13.51□□□□□ -0.25
USP11-208ENST00000480104 ZNF605Q86T29 641 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
USP11-208ENST00000480104 CHCHD4Q8N4Q1 142 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 SLC39A7Q92504 469 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 CUL5Q93034 780 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 MBOAT7Q96N66 472 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
USP11-208ENST00000480104 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
USP11-208ENST00000480104 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 HCFC1R1Q9NWW0 138 aa13.51□□□□□ -0.25
USP11-208ENST00000480104 COL4A2P08572 1712 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 IGKV6D-21A0A0A0MT36 114 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 PALM3A6NDB9 673 aaPredicted RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 PIK3CDO00329 1044 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 CYTH3O43739 400 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 XYLBO75191 536 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 CAVIN2O95810 425 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 CREB5Q02930 508 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 UAP1L1Q3KQV9 507 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 PLK5Q496M5 336 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 PABPC1LQ4VXU2 614 aaKnown RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 WDR44Q5JSH3 913 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 PPM1LQ5SGD2 360 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 PDXDC2PQ6P474 469 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 POTEHQ6S545 545 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 LRRC71Q8N4P6 559 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 LINC01465Q8N7H1 131 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 PIBF1Q8WXW3 757 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 ELSPBP1Q96BH3 223 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 CRELD1Q96HD1 420 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 UBL7Q96S82 380 aaPredicted RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 CCDC86Q9H6F5 360 aaKnown RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 RIOX1Q9H6W3 641 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.5□□□□□ -0.25
USP11-208ENST00000480104 FAM105AQ9NUU6 356 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 KCNH3Q9ULD8 1083 aa13.5□□□□□ -0.25
USP11-208ENST00000480104 MTCL1Q9Y4B5 1905 aaKnown RBP13.5□□□□□ -0.25
USP11-208ENST00000480104 SPTAN1Q13813 2472 aaKnown RBP13.49□□□□□ -0.25
USP11-208ENST00000480104 NFASCO94856 1347 aa13.49□□□□□ -0.25
USP11-208ENST00000480104 B4E1Z4 1266 aa13.49□□□□□ -0.25
USP11-208ENST00000480104 ATG7O95352 703 aa13.49□□□□□ -0.25
USP11-208ENST00000480104 CCNE2O96020 404 aa13.49□□□□□ -0.25
USP11-208ENST00000480104 C8AP07357 584 aa13.49□□□□□ -0.25
USP11-208ENST00000480104 SKIP12755 728 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms