RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CATSPER3Q86XQ3 398 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 NOSTRINQ8IVI9 506 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 HACE1Q8IYU2 909 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 MCPH1Q8NEM0 835 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 KIF2CQ99661 725 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 TMEM175Q9BSA9 504 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-218ENST00000479554 TRIM6Q9C030 488 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-218ENST00000479554 DBR1Q9UK59 544 aaKnown RBP15.9■□□□□ 0.14
ATG4B-218ENST00000479554 NOL7Q9UMY1 257 aaKnown RBP15.9■□□□□ 0.14
ATG4B-218ENST00000479554 ARIH1Q9Y4X5 557 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-218ENST00000479554 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
ATG4B-218ENST00000479554 LRRIQ4A6NIV6 560 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 ARF4P18085 180 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-218ENST00000479554 TRAPPC10P48553 1259 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 RABEP1Q15276 862 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 CES5AQ6NT32 575 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 POTEGQ6S5H5 508 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 SNX21Q969T3 373 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 NACC1Q96RE7 527 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 GPRC5CQ9NQ84 441 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 DZANK1Q9NVP4 752 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 FAN1Q9Y2M0 1017 aa15.89■□□□□ 0.13
ATG4B-218ENST00000479554 ARL5CA6NH57 179 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 NRP1O14786 923 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 B4GALT5O43286 388 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 ALDH2P05091 517 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 RPA1P27694 616 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 MLH1P40692 756 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 ITIH3Q06033 890 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 PTPN14Q15678 1187 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 SLC27A1Q6PCB7 646 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 ZBTB8OSQ8IWT0 167 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 GAD1Q99259 594 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 VN1R3Q9BXE9 311 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 NXF3Q9H4D5 531 aaKnown RBP15.88■□□□□ 0.13
ATG4B-218ENST00000479554 PRG3Q9Y2Y8 225 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-218ENST00000479554 HES2Q9Y543 173 aa15.88■□□□□ 0.13
ATG4B-218ENST00000479554 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 INPPL1O15357 1258 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 NPTXRO95502 500 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 SSBP05455 408 aaKnown RBP eCLIP15.87■□□□□ 0.13
ATG4B-218ENST00000479554 EPCAMP16422 314 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 OR1G1P47890 313 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 SCNN1GP51170 649 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 CDCA2Q69YH5 1023 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-218ENST00000479554 PPFIBP1Q86W92 1011 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 CDR2LQ86X02 465 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-218ENST00000479554 HSCBQ8IWL3 235 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 EDAQ92838 391 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 ZFP42Q96MM3 310 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 NECTIN4Q96NY8 510 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 EMILIN2Q9BXX0 1053 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 C2orf40Q9H1Z8 148 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 ADAM7Q9H2U9 754 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-218ENST00000479554 CDH22Q9UJ99 828 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 GIT1Q9Y2X7 761 aa15.87■□□□□ 0.13
ATG4B-218ENST00000479554 WDFY4Q6ZS81 3184 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 MUTP22033 750 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 SP100P23497 879 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-218ENST00000479554 MTHFRP42898 656 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
ATG4B-218ENST00000479554 NBR1Q14596 966 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 RARS2Q5T160 578 aaKnown RBP15.86■□□□□ 0.13
ATG4B-218ENST00000479554 PADI6Q6TGC4 694 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 HFE2Q6ZVN8 426 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 COLGALT2Q8IYK4 626 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 PRIMPOLQ96LW4 560 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 RIPOR3Q96MK2 946 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 HERC2P3Q9BVR0 1158 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 MRPL17Q9NRX2 175 aaKnown RBP15.86■□□□□ 0.13
ATG4B-218ENST00000479554 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 NR2E1Q9Y466 385 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 KIF3AQ9Y496 699 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 ZMYM2Q9UBW7 1377 aa15.86■□□□□ 0.13
ATG4B-218ENST00000479554 A0A1B0GUA9 196 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 ST18O60284 1047 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 NR1I2O75469 434 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 SOD2P04179 222 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 URODP06132 367 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 AKAP5P24588 427 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.133e-9■■□□□ 14.1
ATG4B-218ENST00000479554 CCT6AP40227 531 aaKnown RBP15.85■□□□□ 0.13
ATG4B-218ENST00000479554 ZXDAP98168 799 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 DSC1Q08554 894 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 TMEM132AQ24JP5 1023 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 CABP7Q86V35 215 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 C12orf76Q8N812 135 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-218ENST00000479554 SLC22A17Q8WUG5 538 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 RPS6KC1Q96S38 1066 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 RAB34Q9BZG1 259 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 POMKQ9H5K3 350 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 MARCH5Q9NX47 278 aa15.85■□□□□ 0.13
ATG4B-218ENST00000479554 MIOSQ9NXC5 875 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms