RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 GPD1LQ8N335 351 aa20.85■□□□□ 0.93
ABCA2-217ENST00000479446 BTBD6Q96KE9 485 aa20.85■□□□□ 0.93
ABCA2-217ENST00000479446 C7orf25Q9BPX7 421 aa20.85■□□□□ 0.93
ABCA2-217ENST00000479446 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.85■□□□□ 0.93
ABCA2-217ENST00000479446 AKR1B1P15121 316 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 LCA5Q86VQ0 697 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 PRPF38AQ8NAV1 312 aaKnown RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 HUS1O60921 280 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 BYSLQ13895 437 aaKnown RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 ZBTB18Q99592 522 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 PNMA3Q9UL41 463 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 ADRA2BP18089 450 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 FXR1P51114 621 aaKnown RBP eCLIP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 NCAPHQ15003 741 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 DALRD3Q5D0E6 543 aaKnown RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 TUFT1Q9NNX1 390 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 MRPL40Q9NQ50 206 aaKnown RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 STAP1Q9ULZ2 295 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 GUCY1A3Q02108 690 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 HEATR6Q6AI08 1181 aaKnown RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 POLR3FQ9H1D9 316 aaPredicted RBP20.84■□□□□ 0.93
ABCA2-217ENST00000479446 SMYD3Q9H7B4 428 aa20.84■□□□□ 0.93
ABCA2-217ENST00000479446 FAM205CA6NFA0 338 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 C21orf2O43822 256 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 ECE2O60344 883 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 NSUN4Q96CB9 384 aaKnown RBP20.83■□□□□ 0.93
ABCA2-217ENST00000479446 ECT2Q9H8V3 914 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 REREQ9P2R6 1566 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 RTN2O75298 545 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 ROR1Q01973 937 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 STAT4Q14765 748 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 F8W8V4 182 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 FOXP2O15409 715 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 AP3M2P53677 418 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 TAP1Q03518 808 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 PARP9Q8IXQ6 854 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 BEST2Q8NFU1 509 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 SENP1Q9P0U3 644 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 INPP5FQ9Y2H2 1132 aa20.83■□□□□ 0.93
ABCA2-217ENST00000479446 KITP10721 976 aa20.83■□□□□ 0.92
ABCA2-217ENST00000479446 KRT17Q04695 432 aa20.83■□□□□ 0.92
ABCA2-217ENST00000479446 FSD1LQ9BXM9 530 aa20.83■□□□□ 0.92
ABCA2-217ENST00000479446 MRPL4Q9BYD3 311 aaKnown RBP20.83■□□□□ 0.92
ABCA2-217ENST00000479446 PARVAQ9NVD7 372 aa20.83■□□□□ 0.92
ABCA2-217ENST00000479446 EEF1DP29692 281 aaKnown RBP20.83■□□□□ 0.92
ABCA2-217ENST00000479446 ZBTB17Q13105 803 aa20.83■□□□□ 0.92
ABCA2-217ENST00000479446 NUDCD3Q8IVD9 361 aa20.83■□□□□ 0.92
ABCA2-217ENST00000479446 RBAKQ9NYW8 714 aaPredicted RBP20.83■□□□□ 0.92
ABCA2-217ENST00000479446 ZNF185O15231 689 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 SLC1A1P43005 524 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 NFX1Q12986 1120 aaKnown RBP20.82■□□□□ 0.92
ABCA2-217ENST00000479446 CDKL3Q8IVW4 592 aaPredicted RBP20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ASAP2O43150 1006 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 HSPA9P38646 679 aaKnown RBP20.82■□□□□ 0.92
ABCA2-217ENST00000479446 TC2NQ8N9U0 490 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ATL2Q8NHH9 583 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ARHGEF40Q8TER5 1519 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 KIAA1755Q5JYT7 1200 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 SEPT12Q8IYM1 358 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ZNF526Q8TF50 670 aaPredicted RBP20.82■□□□□ 0.92
ABCA2-217ENST00000479446 BFARQ9NZS9 450 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 CRB1P82279 1406 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 CHGBP05060 677 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ACTN3Q08043 901 aaPredicted RBP20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ABTB1Q969K4 478 aaPredicted RBP20.82■□□□□ 0.92
ABCA2-217ENST00000479446 GTSE1Q9NYZ3 720 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 ZHX2Q9Y6X8 837 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 MORF4L2Q15014 288 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 CEP55Q53EZ4 464 aa20.82■□□□□ 0.92
ABCA2-217ENST00000479446 AGTP01019 485 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 MDH1P40925 334 aaKnown RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 TEDDM1Q5T9Z0 273 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 HPS3Q969F9 1004 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 NMT1P30419 496 aaKnown RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 PARD3BQ8TEW8 1205 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 STK33Q9BYT3 514 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 AGO2Q9UKV8 859 aaKnown RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 ZCCHC11Q5TAX3 1644 aaKnown RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 FDX1P10109 184 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 CCNI2Q6ZMN8 369 aaPredicted RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 DRP2Q13474 957 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 SYDE1Q6ZW31 735 aaPredicted RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 ALKQ9UM73 1620 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 SCP2P22307 547 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 AP2B1P63010 937 aa20.81■□□□□ 0.92
ABCA2-217ENST00000479446 SPDYE1Q8NFV5 336 aaPredicted RBP20.81■□□□□ 0.92
ABCA2-217ENST00000479446 SBK1Q52WX2 424 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 CCNYL1Q8N7R7 359 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 FAM161BQ96MY7 647 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 PCDHA10Q9Y5I2 948 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 CCDC195A0A1B0GUA6 201 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 CYP26A1O43174 497 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 GPSM2P81274 684 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 LRRC23Q53EV4 343 aaPredicted RBP20.8■□□□□ 0.92
ABCA2-217ENST00000479446 LRIG3Q6UXM1 1119 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 RAD9BQ6WBX8 426 aa20.8■□□□□ 0.92
ABCA2-217ENST00000479446 THEM5Q8N1Q8 247 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms