RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 JAM2P57087 298 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 TARBP2Q15633 366 aaKnown RBP4.48□□□□□ -1.69
USP25-208ENST00000478932 ZBTB41Q5SVQ8 909 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 CELF3Q5SZQ8 465 aaKnown RBP4.48□□□□□ -1.69
USP25-208ENST00000478932 CST9Q5W186 159 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 CCDC62Q6P9F0 684 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 SV2AQ7L0J3 742 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 SRGAP1Q7Z6B7 1085 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 CDR2LQ86X02 465 aaPredicted RBP4.48□□□□□ -1.69
USP25-208ENST00000478932 SPNS2Q8IVW8 549 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 PPM1KQ8N3J5 372 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 METTL13Q8N6R0 699 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 EHBP1Q8NDI1 1231 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 TAS1R2Q8TE23 839 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 COG1Q8WTW3 980 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 SPIRE2Q8WWL2 714 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 SEMA4DQ92854 862 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 CEP89Q96ST8 783 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 MMS19Q96T76 1030 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 GPR20Q99678 358 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 RHOXF2Q9BQY4 288 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 TCHPQ9BT92 498 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 PI4K2AQ9BTU6 479 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 TIPINQ9BVW5 301 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 TARS2Q9BW92 718 aaKnown RBP4.48□□□□□ -1.69
USP25-208ENST00000478932 STK33Q9BYT3 514 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 GPR88Q9GZN0 384 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 RNPEPQ9H4A4 650 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 MROH8Q9H579 483 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 PDE11AQ9HCR9 933 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 NMRK2Q9NPI5 230 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 NRBP2Q9NSY0 501 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 ZNF446Q9NWS9 450 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 ANKFY1Q9P2R3 1169 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 CHORDC1Q9UHD1 332 aaPredicted RBP4.48□□□□□ -1.69
USP25-208ENST00000478932 PACSIN2Q9UNF0 486 aaPredicted RBP4.48□□□□□ -1.69
USP25-208ENST00000478932 EXOC7Q9UPT5 735 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 OTOFQ9HC10 1997 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 UBE4BO95155 1302 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 IGSF9BQ9UPX0 1349 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 EVPLQ92817 2033 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 PAPPA2Q9BXP8 1791 aa4.48□□□□□ -1.69
USP25-208ENST00000478932 LCTP09848 1927 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 PDE2AO00408 941 aaPredicted RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 DDX3XO00571 662 aaKnown RBP eCLIP4.47□□□□□ -1.69
USP25-208ENST00000478932 FTCDO95954 541 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 EDN1P05305 212 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 CETPP11597 493 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 HARSP12081 509 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 LIG4P49917 911 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 MXI1P50539 228 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 RNASE9P60153 205 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 IGBP1P78318 339 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 MRPS25P82663 173 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 CETN1Q12798 172 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 STRN3Q13033 797 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 PRPF4BQ13523 1007 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 MYBPC2Q14324 1141 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 PAPD7Q5XG87 772 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 SCARA3Q6AZY7 606 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 NFRKBQ6P4R8 1299 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 ZNF662Q6ZS27 426 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 ARMCX2Q7L311 632 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 RSRC2Q7L4I2 434 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 ARHGEF19Q8IW93 802 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 C12orf56Q8IXR9 622 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 RNF149Q8NC42 400 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 TRIM58Q8NG06 486 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 DEPTORQ8TB45 409 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 PPP1R13LQ8WUF5 828 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 RNF25Q96BH1 459 aaPredicted RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 NIFKQ9BYG3 293 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 PARD6BQ9BYG5 372 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 HAPLN2Q9GZV7 340 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 PDCL3Q9H2J4 239 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 GBA2Q9HCG7 927 aaPredicted RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 SEPT11Q9NVA2 429 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 SMARCAL1Q9NZC9 954 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 EHD2Q9NZN4 543 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 JRKLQ9Y4A0 524 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 BZW2Q9Y6E2 419 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 ZNFX1Q9P2E3 1918 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 CDH23Q9H251 3354 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 CTAGE15A4D2H0 777 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 ZNF233A6NK53 670 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 LRRIQ3A6PVS8 624 aaPredicted RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 ZBTB42B2RXF5 422 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 TACC1O75410 805 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 PALMO75781 387 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 CALCAP01258 141 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 CTAGE8P0CG41 777 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 TNNI1P19237 187 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 ABCB4P21439 1286 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 SOX5P35711 763 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 ARL2P36404 184 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 ADCYAP1R1P41586 468 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 MATR3P43243 847 aaKnown RBP eCLIP4.47□□□□□ -1.69
USP25-208ENST00000478932 NOP2P46087 812 aaKnown RBP4.47□□□□□ -1.69
USP25-208ENST00000478932 GTF2A2P52657 109 aa4.47□□□□□ -1.69
USP25-208ENST00000478932 RTP1P59025 263 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms