RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 SOBPA7XYQ1 873 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 MAFGO15525 162 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 KLRC2P26717 231 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 SLC26A2P50443 739 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 STAT5BP51692 787 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 MTMR1Q13613 665 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 HTR4Q13639 388 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 INF2Q27J81 1249 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 KIZQ2M2Z5 673 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
USP11-207ENST00000478596 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 KLHL5Q96PQ7 755 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 OSMRQ99650 979 aa16.21■□□□□ 0.19
USP11-207ENST00000478596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.21■□□□□ 0.19
USP11-207ENST00000478596 GPR32O75388 356 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 PAPLNO95428 1278 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 F13A1P00488 732 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 LAMP2P13473 410 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 NCLP19338 710 aaKnown RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 CLK2P49760 499 aaKnown RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 PKP1Q13835 747 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 NPY5RQ15761 445 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 FOXD4L6Q3SYB3 417 aaPredicted RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 LAIR1Q6GTX8 287 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 FOXD4L3Q6VB84 417 aaPredicted RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 HELQQ8TDG4 1101 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 ZSCAN16Q9H4T2 348 aaPredicted RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 PRMT8Q9NR22 394 aaPredicted RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 SLC9A2Q9UBY0 812 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 STK39Q9UEW8 545 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
USP11-207ENST00000478596 UBIAD1Q9Y5Z9 338 aa16.2■□□□□ 0.18
USP11-207ENST00000478596 C2orf16Q68DN1 1984 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 A0A0U1RQF3 1178 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 CCDC195A0A1B0GUA6 201 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 ADAMTS3O15072 1205 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 LILRB3O75022 631 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
USP11-207ENST00000478596 SREBF1P36956 1147 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 PRKCQQ04759 706 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 N4BP2L1Q5TBK1 243 aaPredicted RBP16.19■□□□□ 0.18
USP11-207ENST00000478596 RSPO2Q6UXX9 243 aaPredicted RBP16.19■□□□□ 0.18
USP11-207ENST00000478596 NEK8Q86SG6 692 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 RNF169Q8NCN4 708 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 BCL7CQ8WUZ0 217 aaPredicted RBP16.19■□□□□ 0.18
USP11-207ENST00000478596 VN1R3Q9BXE9 311 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 MAN1C1Q9NR34 630 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 PKD2L1Q9P0L9 805 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 MTF2Q9Y483 593 aaPredicted RBP16.19■□□□□ 0.18
USP11-207ENST00000478596 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 NUMBLQ9Y6R0 609 aa16.19■□□□□ 0.18
USP11-207ENST00000478596 COL1A2P08123 1366 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 PATJQ8NI35 1801 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 FAM170BA6NMN3 283 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 MARCH6O60337 910 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 HBP1O60381 514 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
USP11-207ENST00000478596 ZC3H11AO75152 810 aaKnown RBP eCLIP16.18■□□□□ 0.18
USP11-207ENST00000478596 RETP07949 1114 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 RESTQ13127 1097 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 SNW1Q13573 536 aaKnown RBP16.18■□□□□ 0.18
USP11-207ENST00000478596 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
USP11-207ENST00000478596 CLDN23Q96B33 292 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
USP11-207ENST00000478596 SEMA4GQ9NTN9 838 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 DPP7Q9UHL4 492 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 RAB23Q9ULC3 237 aa16.18■□□□□ 0.18
USP11-207ENST00000478596 M0R2N6 131 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 FOXD2O60548 495 aaPredicted RBP16.17■□□□□ 0.18
USP11-207ENST00000478596 GALTP07902 379 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 U2AF2P26368 475 aaKnown RBP eCLIP16.17■□□□□ 0.18
USP11-207ENST00000478596 ACTR2P61160 394 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 GPC5P78333 572 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 UBXN2BQ14CS0 331 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 MLF2Q15773 248 aaPredicted RBP16.17■□□□□ 0.18
USP11-207ENST00000478596 CSRP2Q16527 193 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 ELMSAN1Q6PJG2 1045 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 PRR23CQ6ZRP0 262 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 CELF5Q8N6W0 485 aaKnown RBP16.17■□□□□ 0.18
USP11-207ENST00000478596 TNFRSF25Q93038 417 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 JADE2Q9NQC1 790 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 TCEAL9Q9UHQ7 104 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 ZMIZ1Q9ULJ6 1067 aa16.17■□□□□ 0.18
USP11-207ENST00000478596 TCHHQ07283 1943 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 INPPL1O15357 1258 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 ATG7O95352 703 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 MCM7P33993 719 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 RPS9P46781 194 aaKnown RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 SLC44A4Q53GD3 710 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 RILPL1Q5EBL4 403 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 ZNF484Q5JVG2 852 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms