RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 PSMA7O14818 248 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDCD11-204ENST00000478543 ASAP2O43150 1006 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 KIF20AO95235 890 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 CTSHP09668 335 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
PDCD11-204ENST00000478543 PHKA2P46019 1235 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 ZNF165P49910 485 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 GPC3P51654 580 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 TAP1Q03518 808 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 KCNA1Q09470 495 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 PAK1Q13153 545 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 TAF2Q6P1X5 1199 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 SERINC5Q86VE9 423 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
PDCD11-204ENST00000478543 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 RNF214Q8ND24 703 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
PDCD11-204ENST00000478543 NAT10Q9H0A0 1025 aaKnown RBP12.84□□□□□ -0.35
PDCD11-204ENST00000478543 IKZF4Q9H2S9 585 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 CBX8Q9HC52 389 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 ARHGAP28Q9P2N2 729 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 UBE4BO95155 1302 aa12.84□□□□□ -0.35
PDCD11-204ENST00000478543 ZMYM2Q9UBW7 1377 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 TRIM49BA6NDI0 452 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 H0YCG3 227 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
PDCD11-204ENST00000478543 PPP1R37O75864 691 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 HOXD13P35453 343 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 PPP1R2P41236 205 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
PDCD11-204ENST00000478543 GTF2BQ00403 316 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 NHLH1Q02575 133 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 PTK7Q13308 1070 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 ALCAMQ13740 583 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 COBLL1Q53SF7 1204 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 CDCA2Q69YH5 1023 aaPredicted RBP12.83□□□□□ -0.36
PDCD11-204ENST00000478543 TAS1R3Q7RTX0 852 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 SYCP3Q8IZU3 236 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 DHX38Q92620 1227 aaKnown RBP12.83□□□□□ -0.36
PDCD11-204ENST00000478543 P2RX5Q93086 422 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 HLA-CQ95604 372 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 DHTKD1Q96HY7 919 aaPredicted RBP12.83□□□□□ -0.36
PDCD11-204ENST00000478543 ACCSQ96QU6 501 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 OSMRQ99650 979 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 NTPCRQ9BSD7 190 aaKnown RBP12.83□□□□□ -0.36
PDCD11-204ENST00000478543 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 TBX20Q9UMR3 447 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 COG5Q9UP83 839 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 USP20Q9Y2K6 914 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 PHLPP2Q6ZVD8 1323 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
PDCD11-204ENST00000478543 PRR33A8MZF0 331 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 INO80B-WBP1J3KQ70 363 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 K7ERI5 159 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 TLR3O15455 904 aaKnown RBP12.82□□□□□ -0.36
PDCD11-204ENST00000478543 GPR32O75388 356 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 PRKCBP05771 671 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 CCNE1P24864 410 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 THPOP40225 353 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 PMS1P54277 932 aaKnown RBP12.82□□□□□ -0.36
PDCD11-204ENST00000478543 PTENP60484 403 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 STRN3Q13033 797 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
PDCD11-204ENST00000478543 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 LUZP1Q86V48 1076 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 ZNF410Q86VK4 478 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 NME8Q8N427 588 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 FAM200AQ8TCP9 573 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 HVCN1Q96D96 273 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 BICD1Q96G01 975 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 MED15Q96RN5 788 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 PHOX2BQ99453 314 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 TSG101Q99816 390 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 INO80BQ9C086 356 aaPredicted RBP12.82□□□□□ -0.36
PDCD11-204ENST00000478543 RBSNQ9H1K0 784 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
PDCD11-204ENST00000478543 ADAMTS10Q9H324 1103 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 MINDY3Q9H8M7 445 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 RWDD2AQ9UIY3 292 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 TRPV2Q9Y5S1 764 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 SIP14410 1827 aa12.82□□□□□ -0.36
PDCD11-204ENST00000478543 TISP43B9A030 160 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 M0QZ92 97 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 EDN1P05305 212 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 FGFR4P22455 802 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms