RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SKIP12755 728 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CMA1P23946 247 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CTNNB1P35222 781 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 AFMP43652 599 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 FAM189BP81408 668 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 STRN3Q13033 797 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CLLU1OSQ5K130 101 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 UBXN11Q5T124 520 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 SLC27A1Q6PCB7 646 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 SFR1Q86XK3 245 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 FAM178BQ8IXR5 827 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 GRAMD1CQ8IYS0 662 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CEP57L1Q8IYX8 460 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 TMEM161BQ8NDZ6 487 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 SP7Q8TDD2 431 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 MYLIPQ8WY64 445 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 MRPS27Q92552 414 aaKnown RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF689Q96CS4 500 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CCDC51Q96ER9 411 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 GUCD1Q96NT3 240 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 TGS1Q96RS0 853 aaKnown RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 ADPGKQ9BRR6 497 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 TNMDQ9H2S6 317 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 FZD8Q9H461 694 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CUEDC2Q9H467 287 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 GOLPH3LQ9H4A5 285 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 NXF3Q9H4D5 531 aaKnown RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 PDZD7Q9H5P4 517 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 ELAC1Q9H777 363 aaKnown RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CHMP5Q9NZZ3 219 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 TBC1D7Q9P0N9 293 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 ANKFY1Q9P2R3 1169 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 IPPQ9Y573 584 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 MRPL42Q9Y6G3 142 aaKnown RBP7.59□□□□□ -1.2
BRCA1-215ENST00000478531 BRWD1Q9NSI6 2320 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 A0A1B0GUA9 196 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 RFXAPO00287 272 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 N4BP3O15049 544 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 TRAK2O60296 914 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 EOMESO95936 686 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 MAPTP10636 758 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 CASP1P29466 404 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 NMT1P30419 496 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 MATR3P43243 847 aaKnown RBP eCLIP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 SYKP43405 635 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 NDUFA8P51970 172 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF131P52739 623 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 NCKAP1LP55160 1127 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 ASIC1P78348 528 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 FAM187BQ17R55 369 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 ATF7IP2Q5U623 682 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 EEF1DP3Q658K8 133 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 GLB1LQ6UWU2 654 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 FAM43BQ6ZT52 329 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 HAUS6Q7Z4H7 955 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF598Q86UK7 904 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 CMTR2Q8IYT2 770 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 SMG8Q8ND04 991 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 FBXO22Q8NEZ5 403 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 SPIRE2Q8WWL2 714 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 DNAJC19Q96DA6 116 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 PGBD4Q96DM1 585 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 CDX2Q99626 313 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 MRPL4Q9BYD3 311 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 BLZF1Q9H2G9 400 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 MRPL44Q9H9J2 332 aaKnown RBP7.58□□□□□ -1.2
BRCA1-215ENST00000478531 RNF19AQ9NV58 838 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 MTMR10Q9NXD2 777 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
BRCA1-215ENST00000478531 H0YCG3 227 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 HNRNPDLO14979 420 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ITGA4P13612 1032 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 FOSL2P15408 326 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 IGFBP4P22692 258 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 AKAP5P24588 427 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 PBX3P40426 434 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 AMPD3Q01432 767 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 RNASELQ05823 741 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 PDCD11Q14690 1871 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF568Q3ZCX4 644 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 EPC2Q52LR7 807 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 HERC4Q5GLZ8 1057 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 NT5DC1Q5TFE4 455 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TMEM192Q8IY95 271 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 HACE1Q8IYU2 909 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 LRRC43Q8N309 656 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 MICALL1Q8N3F8 863 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 IPO9Q96P70 1041 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 CASD1Q96PB1 797 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 GAS2L1Q99501 681 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ACO2Q99798 780 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 PYM1Q9BRP8 204 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TARS2Q9BW92 718 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TRAIPQ9BWF2 469 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TRIM9Q9C026 710 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TMEM117Q9H0C3 514 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms