RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 RBM15Q96T37 977 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 AGO3Q9H9G7 860 aaKnown RBP5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 DMRT3Q9NQL9 472 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 SAP30BPQ9UHR5 308 aaKnown RBP5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 SCOCQ9UIL1 159 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 DNM3Q9UQ16 869 aa5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 LUC7L2Q9Y383 392 aaKnown RBP5.22□□□□□ -1.57
SMARCA1-204ENST00000478420 GASTP01350 101 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 C5AR1P21730 350 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 ECHS1P30084 290 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 EPHB1P54762 984 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 DUSP8Q13202 625 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 GRM7Q14831 915 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 ODF1Q14990 250 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 NOMO1Q15155 1222 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 OR5M3Q8NGP4 307 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 ZNF480Q8WV37 535 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 ARL8AQ96BM9 186 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 HOOK2Q96ED9 719 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 TCF25Q9BQ70 676 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 SSBP3Q9BWW4 388 aaPredicted RBP5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 PLA2G3Q9NZ20 509 aa5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 ZFR2Q9UPR6 939 aaKnown RBP5.21□□□□□ -1.58
SMARCA1-204ENST00000478420 E2F8A0AVK6 867 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 RAD17O75943 681 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 CASRP41180 1078 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 MCL1Q07820 350 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 PPP3CAQ08209 521 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 MST1LQ2TV78 715 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 TMEM240Q5SV17 173 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 FAM111BQ6SJ93 734 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 FUKQ8N0W3 1084 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 THEMISQ8N1K5 641 aaPredicted RBP5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 TMEM176AQ96HP8 235 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 GPRC5DQ9NZD1 345 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 TUBD1Q9UJT1 453 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 CNOT11Q9UKZ1 510 aaKnown RBP5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 SLC30A1Q9Y6M5 507 aa5.2□□□□□ -1.58
SMARCA1-204ENST00000478420 FAM171A2A8MVW0 826 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 PATE3B3GLJ2 98 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 K7ESM1 405 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 FOXS1O43638 330 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 FOXD2O60548 495 aaPredicted RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 ITGA10O75578 1167 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 ENDOD1O94919 500 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 CT47B1P0C2W7 299 aaPredicted RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 SYN1P17600 705 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 CRHR1P34998 444 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 ADKP55263 362 aaKnown RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 PER3P56645 1201 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 KIF23Q02241 960 aaPredicted RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 MGAT2Q10469 447 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 PIN1Q13526 163 aaPredicted RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 LILRA6Q6PI73 481 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 POLNQ7Z5Q5 900 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 MIER2Q8N344 545 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 CPA6Q8N4T0 437 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 NRG4Q8WWG1 115 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 LOXL4Q96JB6 756 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 UHRF1Q96T88 793 aaPredicted RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 CDC5LQ99459 802 aaKnown RBP5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 CSRNP2Q9H175 543 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 EPC1Q9H2F5 836 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 BCO1Q9HAY6 547 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 IP6K2Q9UHH9 426 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 INTUQ9ULD6 942 aa5.19□□□□□ -1.58
SMARCA1-204ENST00000478420 AKAP10O43572 662 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 ZNF623O75123 536 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 IL33O95760 270 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 MSX2P35548 267 aaPredicted RBP5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 WASP42768 502 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 GZMKP49863 264 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 RAB27AP51159 221 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 HHEXQ03014 270 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 HS1BP3Q53T59 392 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 FKBP15Q5T1M5 1219 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 MFSD5Q6N075 450 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 Q6ZVL8 140 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 PDZD4Q76G19 769 aaPredicted RBP5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 CMTR2Q8IYT2 770 aaKnown RBP5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 D2HGDHQ8N465 521 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 CHST13Q8NET6 341 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 DNERQ8NFT8 737 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 OR7D4Q8NG98 312 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 JDP2Q8WYK2 163 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 IL17RAQ96F46 866 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 ZNF512Q96ME7 567 aaPredicted RBP5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 SAMD11Q96NU1 681 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 MPHOSPH9Q99550 1183 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 C7orf25Q9BPX7 421 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 ENKD1Q9H0I2 346 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 TCF7L1Q9HCS4 588 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 TRPS1Q9UHF7 1281 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 THRAP3Q9Y2W1 955 aaKnown RBP5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 GIT1Q9Y2X7 761 aa5.18□□□□□ -1.58
SMARCA1-204ENST00000478420 ABLIM3O94929 683 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 ZRANB2O95218 330 aaKnown RBP eCLIP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms