RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 APPBP2Q92624 585 aa6.15□□□□□ -1.42
LMBR1-216ENST00000477983 PDCD2LQ9BRP1 358 aa6.15□□□□□ -1.42
LMBR1-216ENST00000477983 TTPALQ9BTX7 342 aa6.15□□□□□ -1.42
LMBR1-216ENST00000477983 ING3Q9NXR8 418 aa6.15□□□□□ -1.42
LMBR1-216ENST00000477983 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
LMBR1-216ENST00000477983 FZD1Q9UP38 647 aa6.15□□□□□ -1.42
LMBR1-216ENST00000477983 DHX57Q6P158 1386 aaKnown RBP6.15□□□□□ -1.43
LMBR1-216ENST00000477983 TGM5O43548 720 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 GAS7O60861 476 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 GNAT2P19087 354 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 NR4A1P22736 598 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 NEK4P51957 841 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 CD69Q07108 199 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 LRRTM3Q86VH5 581 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 NXPE1Q8N323 547 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 MB21D1Q8N884 522 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 NINJ1Q92982 152 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 ZNF496Q96IT1 587 aaPredicted RBP6.14□□□□□ -1.43
LMBR1-216ENST00000477983 FANCLQ9NW38 375 aa6.14□□□□□ -1.43
LMBR1-216ENST00000477983 LRRIQ1Q96JM4 1722 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 ZNF891A8MT65 544 aaPredicted RBP6.13□□□□□ -1.43
LMBR1-216ENST00000477983 NRP1O14786 923 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 PPFIA4O75335 1185 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 ALDH1A2O94788 518 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 GPR15P49685 360 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 ESPNLQ6ZVH7 1005 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 TAS1R1Q7RTX1 841 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 DNAJC10Q8IXB1 793 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 CDYL2Q8N8U2 506 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 CHTF18Q8WVB6 975 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 ZG16BQ96DA0 208 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 PGBD4Q96DM1 585 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.13□□□□□ -1.43
LMBR1-216ENST00000477983 PCDHB6Q9Y5E3 794 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 MTUS2Q5JR59 1369 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 HECW1Q76N89 1606 aa6.13□□□□□ -1.43
LMBR1-216ENST00000477983 SEC24DO94855 1032 aaPredicted RBP6.12□□□□□ -1.43
LMBR1-216ENST00000477983 PCDH8O95206 1070 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 LY86O95711 162 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 ITGB1P05556 798 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 PFKMP08237 780 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 PHC1P78364 1004 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 CCDC178Q5BJE1 867 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 CCDC18Q5T9S5 1454 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 CNNM4Q6P4Q7 775 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 PHLDB1Q86UU1 1377 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 CCNB3Q8WWL7 1395 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 HS3ST4Q9Y661 456 aa6.12□□□□□ -1.43
LMBR1-216ENST00000477983 COL4A3Q01955 1670 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 RAPGEF6Q8TEU7 1601 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 EPRSP07814 1512 aaKnown RBP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 PRG4Q92954 1404 aaPredicted RBP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 TRIM24O15164 1050 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 GCP02774 474 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 PROZP22891 400 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 WNT3AP56704 352 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 MRPL49Q13405 166 aaKnown RBP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 FAM50AQ14320 339 aaKnown RBP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 ZBTB41Q5SVQ8 909 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 CXorf67Q86X51 503 aaPredicted RBP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 NIM1KQ8IY84 436 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 ANP32EQ9BTT0 268 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 THG1LQ9NWX6 298 aaKnown RBP6.11□□□□□ -1.43
LMBR1-216ENST00000477983 MSRAQ9UJ68 235 aa6.11□□□□□ -1.43
LMBR1-216ENST00000477983 CDK13Q14004 1512 aaKnown RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 CCER2I3L3R5 266 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 CDC45O75419 566 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 RHOBTB3O94955 611 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 CFBP00751 764 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 HK1P19367 917 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 ADRA1BP35368 520 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 KPNA1P52294 538 aaPredicted RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 FAM214AQ32MH5 1076 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 LY6G5CQ5SRR4 150 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 DOK3Q7L591 496 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 DHX37Q8IY37 1157 aaKnown RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 SYNE4Q8N205 404 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 ZNF610Q8N9Z0 462 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 GLB1L3Q8NCI6 653 aaPredicted RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 SMC1BQ8NDV3 1235 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 OR52N2Q8NGI0 321 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 CPPED1Q9BRF8 314 aaPredicted RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 FDXACB1Q9BRP7 624 aaPredicted RBP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
LMBR1-216ENST00000477983 SORCS3Q9UPU3 1222 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 NUMBLQ9Y6R0 609 aa6.1□□□□□ -1.43
LMBR1-216ENST00000477983 EHBP1L1Q8N3D4 1523 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 NCOA2Q15596 1464 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 PLB1Q6P1J6 1458 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 SUPT6HQ7KZ85 1726 aaKnown RBP6.09□□□□□ -1.43
LMBR1-216ENST00000477983 A0A1W2PR48 441 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 NRP2O60462 931 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 DNAJC6O75061 913 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 RECQL4O94761 1208 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 CASRP41180 1078 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 PCBP1Q15365 356 aaKnown RBP eCLIP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms