RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TWF2Q6IBS0 349 aaKnown RBP8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 MIS18BP1Q6P0N0 1132 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 AGMOQ6ZNB7 445 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 TRMT1LQ7Z2T5 733 aaKnown RBP8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 GPR65Q8IYL9 337 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 MBOAT7Q96N66 472 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 PHF20Q9BVI0 1012 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 ADAM33Q9BZ11 813 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 PLA2G2FQ9BZM2 168 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 LMAN1LQ9HAT1 526 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 LY9Q9HBG7 655 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 SLC24A3Q9HC58 644 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 FNIP2Q9P278 1114 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 CEP131Q9UPN4 1083 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 C2orf16Q68DN1 1984 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 DOCK8Q8NF50 2099 aa8.3□□□□□ -1.08
SPTLC1-205ENST00000477888 LAMA4Q16363 1823 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 DDX39AO00148 427 aaKnown RBP8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 GIPC1O14908 333 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 ECI2O75521 394 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 TOP3BO95985 862 aaKnown RBP8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 POMCP01189 267 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 SDSP20132 328 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 KIF5BP33176 963 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 FOXC1Q12948 553 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 POTEHQ6S545 545 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 MRPL10Q7Z7H8 261 aaKnown RBP8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 LONP2Q86WA8 852 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 CKAP2LQ8IYA6 745 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 COLGALT2Q8IYK4 626 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 ITFG1Q8TB96 612 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 FAM193BQ96PV7 902 aaPredicted RBP8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 DSCC1Q9BVC3 393 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 ARRDC1-AS1Q9H2J1 176 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 NDRG2Q9UN36 371 aaKnown RBP8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 PRG3Q9Y2Y8 225 aaPredicted RBP8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 PCDHB2Q9Y5E7 798 aa8.29□□□□□ -1.08
SPTLC1-205ENST00000477888 MAST4O15021 2626 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 F8W810 466 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 K7ESF4 209 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 MAN2B1O00754 1011 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 IFIT3O14879 490 aaKnown RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 AXIN1O15169 862 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 PAPSS2O95340 614 aaPredicted RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 HNRNPA1P09651 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 CHRNB1P11230 501 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 RAB27AP51159 221 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 NOVA1P51513 510 aaKnown RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 CDC42EP1Q00587 391 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 DRP2Q13474 957 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 CCDC6Q16204 474 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 NPAS3Q8IXF0 933 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 URGCPQ8TCY9 931 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 NLRP7Q8WX94 980 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 ZCCHC14Q8WYQ9 949 aaKnown RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 PGBD4Q96DM1 585 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 LOXL4Q96JB6 756 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 B3GALT6Q96L58 329 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 SCLT1Q96NL6 688 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 SCNM1Q9BWG6 230 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 GCOM2Q9BZD3 368 aaPredicted RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 GPR62Q9BZJ7 368 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 SEC63Q9UGP8 760 aaKnown RBP8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 KCNH3Q9ULD8 1083 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 PATJQ8NI35 1801 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 BPTFQ12830 3046 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 LAMA5O15230 3695 aa8.28□□□□□ -1.08
SPTLC1-205ENST00000477888 A0A087WZ62 844 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 RPL17P18621 184 aaKnown RBP8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 HOXA6P31267 233 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 HOXA9P31269 272 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 RAP1GAPP47736 663 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 DSC1Q08554 894 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 TANGO2Q6ICL3 276 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 NIPA1Q7RTP0 329 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 RASEFQ8IZ41 740 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 SPEM1Q8N4L4 309 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 SRBD1Q8N5C6 995 aaKnown RBP8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 IGDCC4Q8TDY8 1250 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 FAM3CQ92520 227 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 KIF12Q96FN5 646 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 FDXACB1Q9BRP7 624 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 RSAD1Q9HA92 442 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 GABBR1Q9UBS5 961 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 FBXW11Q9UKB1 542 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 PIN4Q9Y237 131 aaKnown RBP8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 PCDHB15Q9Y5E8 787 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 PCDHA10Q9Y5I2 948 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 FREM2Q5SZK8 3169 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 MYH6P13533 1939 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 ITPR1Q14643 2758 aa8.27□□□□□ -1.09
SPTLC1-205ENST00000477888 HELZ2Q9BYK8 2649 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms