RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 FNTBP49356 437 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 CCR3P51677 355 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 TROAPQ12815 778 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 MIS18BP1Q6P0N0 1132 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 CWC27Q6UX04 472 aaKnown RBP10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 LINC01465Q8N7H1 131 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 LSM14BQ9BX40 385 aaKnown RBP10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 CHRDQ9H2X0 955 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 CHST12Q9NRB3 414 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 FAM105AQ9NUU6 356 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 BPTFQ12830 3046 aa10.96□□□□□ -0.66
SMARCB1-206ENST00000477836 DOCK6Q96HP0 2047 aa10.96□□□□□ -0.66
SMARCB1-206ENST00000477836 SHISA7A6NL88 538 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 IFIT3O14879 490 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 AXIN1O15169 862 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 SGSM2O43147 1006 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 ZMYND10O75800 440 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 SEC24BO95487 1268 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 POMCP01189 267 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 RBM25P49756 843 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 AFF1P51825 1210 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 SATB1Q01826 763 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 CEP68Q76N32 757 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 FAM160A2Q8N612 972 aaPredicted RBP10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 ZCCHC14Q8WYQ9 949 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 MARCH5Q9NX47 278 aa10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 PIN4Q9Y237 131 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-206ENST00000477836 GREB1Q4ZG55 1949 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 ERICH2A1L162 156 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 CNR2P34972 360 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 OR1G1P47890 313 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 CXCL12P48061 93 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 NOVA1P51513 510 aaKnown RBP10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 DSG1Q02413 1049 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 CEP55Q53EZ4 464 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 HEATR6Q6AI08 1181 aaKnown RBP10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 ITFG1Q8TB96 612 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 PGBD4Q96DM1 585 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 B3GALT6Q96L58 329 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 IER2Q9BTL4 223 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 GCOM2Q9BZD3 368 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 LMAN1LQ9HAT1 526 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 LY9Q9HBG7 655 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 POLIQ9UNA4 740 aa10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-206ENST00000477836 MAN2B1O00754 1011 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 GIPC1O14908 333 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 ZNF623O75123 536 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 TOP3BO95985 862 aaKnown RBP10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 C1RP00736 705 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 ZNF806P0C7X5 589 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 RPL17P18621 184 aaKnown RBP10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 RAB27AP51159 221 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 ZNF252P-AS1Q0IIN9 211 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 LILRA6Q6PI73 481 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 AGMOQ6ZNB7 445 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 CATIPQ7Z7H3 387 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 LONP2Q86WA8 852 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 RNF168Q8IYW5 571 aaPredicted RBP10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 GATA6Q92908 595 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 PLA2G2FQ9BZM2 168 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 RSAD1Q9HA92 442 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 KANSL3Q9P2N6 904 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 WASF3Q9UPY6 502 aa10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 MYH9P35579 1960 aaKnown RBP10.93□□□□□ -0.66
SMARCB1-206ENST00000477836 F8W810 466 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 MEIS1O00470 390 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 CCL16O15467 120 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 EFEMP2O95967 443 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 SFPQP23246 707 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 ZNF76P36508 570 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 TRDNQ13061 729 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 SOWAHCQ53LP3 525 aaPredicted RBP10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 SCNM1Q9BWG6 230 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 C22orf23Q9BZE7 217 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 IL25Q9H293 177 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 GABBR1Q9UBS5 961 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 PCDHB2Q9Y5E7 798 aa10.92□□□□□ -0.66
SMARCB1-206ENST00000477836 A0A087WZ62 844 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 hCG_1642624A0A1W2PR95 340 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 DHX15O43143 795 aaKnown RBP10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms