RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 SFMBT2Q5VUG0 894 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 SLFN12LQ6IEE8 588 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 SWSAP1Q6NVH7 229 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 MAMDC4Q6UXC1 1216 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 VPS36Q86VN1 386 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 CCDC60Q8IWA6 550 aaPredicted RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 RNF10Q8N5U6 811 aaKnown RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 TMEM161BQ8NDZ6 487 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 SMCR8Q8TEV9 937 aaPredicted RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 SCFD2Q8WU76 684 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 TCP11Q8WWU5 503 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 CAPNS2Q96L46 248 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 FBXL18Q96ME1 805 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 UIMC1Q96RL1 719 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 MAP7D2Q96T17 732 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 PAGR1Q9BTK6 254 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 PORCNQ9H237 461 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 DHX33Q9H6R0 707 aaKnown RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 AZI2Q9H6S1 392 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 NHEJ1Q9H9Q4 299 aaPredicted RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 KMT5AQ9NQR1 393 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 ARHGAP28Q9P2N2 729 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 DDX41Q9UJV9 622 aaKnown RBP7.27□□□□□ -1.25
LDB3-206ENST00000477489 TBX20Q9UMR3 447 aa7.27□□□□□ -1.25
LDB3-206ENST00000477489 DOCK5Q9H7D0 1870 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 COL1A2P08123 1366 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 LRRC53A6NM62 1247 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 BTNL10A8MVZ5 291 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 RNF225M0QZC1 329 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 DLL1O00548 723 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 ZBTB39O15060 712 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 ASAP2O43150 1006 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 PJA2O43164 708 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 NOL4O94818 638 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 LDHAP00338 332 aaKnown RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 UCHL3P15374 230 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 FERP16591 822 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 PON1P27169 355 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 MAPK4P31152 587 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 NPTX2P47972 431 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 FMO5P49326 533 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 STAT5BP51692 787 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 EFNA5P52803 228 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 POLGP54098 1239 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 PEX3P56589 373 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 INHBEP58166 350 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 GNG11P61952 73 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 POU5F1Q01860 360 aaKnown RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 CNTN2Q02246 1040 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 POU5F1BQ06416 359 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 KIF5AQ12840 1032 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 LAMC2Q13753 1193 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 MXD4Q14582 209 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 EMC2Q15006 297 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 TARBP2Q15633 366 aaKnown RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 ASTE1Q2TB18 679 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 ZC2HC1CQ53FD0 456 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 CELF3Q5SZQ8 465 aaKnown RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 FAM102BQ5T8I3 360 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 KLHDC7AQ5VTJ3 777 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 CYP4F22Q6NT55 531 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 SYT10Q6XYQ8 523 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 CCDC155Q8N6L0 562 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 PURBQ96QR8 312 aaKnown RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 LSM14BQ9BX40 385 aaKnown RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 GANQ9H2C0 597 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 DEF6Q9H4E7 631 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 SMARCAD1Q9H4L7 1026 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 MLXIPQ9HAP2 919 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 FAM207AQ9NSI2 230 aaPredicted RBP7.26□□□□□ -1.25
LDB3-206ENST00000477489 AGPAT5Q9NUQ2 364 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 INTUQ9ULD6 942 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 STYXL1Q9Y6J8 313 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 IVNS1ABPQ9Y6Y0 642 aa7.26□□□□□ -1.25
LDB3-206ENST00000477489 CCL15-CCL14A0A0B4J2E2 113 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 IGKV6-21A0A0C4DH24 114 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 GSTTP1A0A1W2PQM5 241 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 DENND3A2RUS2 1198 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CTAGE9A4FU28 777 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 MANSC4A6NHS7 340 aaPredicted RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 SFI1A8K8P3 1242 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 PDHXO00330 501 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 AKR1B10O60218 316 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ZC3H11AO75152 810 aaKnown RBP eCLIP7.25□□□□□ -1.25
LDB3-206ENST00000477489 MAFO75444 373 aaPredicted RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 GGPS1O95749 300 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 TUBBP07437 444 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CNGA1P29973 690 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 GJA5P36382 358 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ARL2P36404 184 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 STAT1P42224 750 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ARHGAP25P42331 645 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 VAMP7P51809 220 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 KIF11P52732 1056 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 AP3M2P53677 418 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 NPEPPSP55786 919 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 JAM2P57087 298 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms