RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SMYD4Q8IYR2 804 aaPredicted RBP17.44■□□□□ 0.38
COPS3-207ENST00000477299 RNF169Q8NCN4 708 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 TOP1MTQ969P6 601 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 ST6GALNAC4Q9H4F1 302 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 PTPRHQ9HD43 1115 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 SEL1LQ9UBV2 794 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 KIAA1671Q9BY89 1806 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 ATP2A2P16615 1042 aaKnown RBP17.43■□□□□ 0.38
COPS3-207ENST00000477299 PBX2P40425 430 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
COPS3-207ENST00000477299 TMEM132AQ24JP5 1023 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 SEZ6Q53EL9 994 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 NOTUMQ6P988 496 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 SLC24A5Q71RS6 500 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 ZNF598Q86UK7 904 aaKnown RBP17.43■□□□□ 0.38
COPS3-207ENST00000477299 CEP120Q8N960 986 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 ZSWIM2Q8NEG5 633 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 SCFD1Q8WVM8 642 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 FAM105AQ9NUU6 356 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 EXOC1Q9NV70 894 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 MAPK8IP1Q9UQF2 711 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 PCDHB2Q9Y5E7 798 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 ANK1P16157 1881 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 CITO14578 2027 aa17.43■□□□□ 0.38
COPS3-207ENST00000477299 A0A0U1RQF3 1178 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 BIN1O00499 593 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 RHOBTB3O94955 611 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 ARHGEF15O94989 841 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 AMHP03971 560 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 MYL1P05976 194 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 FGFR1P11362 822 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 PROZP22891 400 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 AXLP30530 894 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 AFF1P51825 1210 aaKnown RBP17.42■□□□□ 0.38
COPS3-207ENST00000477299 STRN3Q13033 797 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 L1TD1Q5T7N2 865 aaKnown RBP17.42■□□□□ 0.38
COPS3-207ENST00000477299 SPRED2Q7Z698 418 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 MAP4K3Q8IVH8 894 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 HERC6Q8IVU3 1022 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 NELFCDQ8IXH7 590 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 SPATA20Q8TB22 786 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 ZNF507Q8TCN5 953 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 KCNN1Q92952 543 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 APOL6Q9BWW8 343 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 MRPL4Q9BYD3 311 aaKnown RBP17.42■□□□□ 0.38
COPS3-207ENST00000477299 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 NXF3Q9H4D5 531 aaKnown RBP17.42■□□□□ 0.38
COPS3-207ENST00000477299 KCNG1Q9UIX4 513 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 MAN1B1Q9UKM7 699 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 TNFSF13BQ9Y275 285 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 IPPQ9Y573 584 aa17.42■□□□□ 0.38
COPS3-207ENST00000477299 TDRD15B5MCY1 1934 aaKnown RBP17.42■□□□□ 0.38
COPS3-207ENST00000477299 ZMYM2Q9UBW7 1377 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 LCHNA4D1U4 455 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 SOX1O00570 391 aaPredicted RBP17.41■□□□□ 0.38
COPS3-207ENST00000477299 HARSP12081 509 aaKnown RBP17.41■□□□□ 0.38
COPS3-207ENST00000477299 BMP6P22004 513 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 PCBP1Q15365 356 aaKnown RBP eCLIP17.41■□□□□ 0.38
COPS3-207ENST00000477299 CLLU1OSQ5K130 101 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 ZBTB41Q5SVQ8 909 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 SLC27A1Q6PCB7 646 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
COPS3-207ENST00000477299 ELOA2Q8IYF1 753 aaPredicted RBP17.41■□□□□ 0.38
COPS3-207ENST00000477299 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 BICD1Q96G01 975 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 CDT1Q9H211 546 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 HCSTQ9UBK5 93 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 YBX2Q9Y2T7 364 aaKnown RBP17.41■□□□□ 0.38
COPS3-207ENST00000477299 PCDHB13Q9Y5F0 798 aa17.41■□□□□ 0.38
COPS3-207ENST00000477299 LAMA2P24043 3122 aaKnown RBP17.4■□□□□ 0.38
COPS3-207ENST00000477299 NLRC5Q86WI3 1866 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 H0YCG3 227 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 N4BP3O15049 544 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 MEFVO15553 781 aaPredicted RBP17.4■□□□□ 0.38
COPS3-207ENST00000477299 EFCAB14O75071 495 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 GJB5O95377 273 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 AKAP5P24588 427 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 ADSSP30520 456 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 OSTNP61366 133 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 NCBP1Q09161 790 aaKnown RBP17.4■□□□□ 0.38
COPS3-207ENST00000477299 AGMOQ6ZNB7 445 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 ACCSQ96QU6 501 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 SLC9A7Q96T83 725 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 TCHPQ9BT92 498 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 MIOSQ9NXC5 875 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 SNTG2Q9NY99 539 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 ANKFY1Q9P2R3 1169 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
COPS3-207ENST00000477299 PDCD11Q14690 1871 aaKnown RBP17.39■□□□□ 0.38
COPS3-207ENST00000477299 HNRNPDLO14979 420 aaKnown RBP17.39■□□□□ 0.37
COPS3-207ENST00000477299 TGFB1I1O43294 461 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 ZNF623O75123 536 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 PIGRP01833 764 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
COPS3-207ENST00000477299 LIG4P49917 911 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms