RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 ISM2Q6H9L7 571 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 RSPH3Q86UC2 560 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 ZNF410Q86VK4 478 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 SMYD4Q8IYR2 804 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-211ENST00000476994 RNF149Q8NC42 400 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 GDPD5Q8WTR4 605 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 ZNF668Q96K58 619 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-211ENST00000476994 IFT74Q96LB3 600 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 SAMD11Q96NU1 681 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 CCDC113Q9H0I3 377 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 CDHR5Q9HBB8 845 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 SLC39A2Q9NP94 309 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 XIRP2A4UGR9 3374 aa19.41■□□□□ 0.7
SREBF1-211ENST00000476994 RALGAPA2Q2PPJ7 1873 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 A0A087WZ62 844 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 EDN1P05305 212 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 CD44P16070 742 aaKnown RBP19.4■□□□□ 0.7
SREBF1-211ENST00000476994 KCNQ1P51787 676 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 NLRP11P59045 1033 aaKnown RBP19.4■□□□□ 0.7
SREBF1-211ENST00000476994 NLRP12P59046 1061 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 MRPS6P82932 125 aaKnown RBP19.4■□□□□ 0.7
SREBF1-211ENST00000476994 TMEM62Q0P6H9 643 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 BMT2Q1RMZ1 405 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.4■□□□□ 0.78e-11■■■■■ 32.9
SREBF1-211ENST00000476994 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 FBXO22Q8NEZ5 403 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 SCFD1Q8WVM8 642 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 CCDC47Q96A33 483 aaKnown RBP19.4■□□□□ 0.7
SREBF1-211ENST00000476994 NLRP4Q96MN2 994 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 YME1L1Q96TA2 773 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 FDXACB1Q9BRP7 624 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-211ENST00000476994 MINDY3Q9H8M7 445 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 MRPL44Q9H9J2 332 aaKnown RBP19.4■□□□□ 0.7
SREBF1-211ENST00000476994 KMT5AQ9NQR1 393 aa19.4■□□□□ 0.7
SREBF1-211ENST00000476994 LRRIQ4A6NIV6 560 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 CCDC169A6NNP5 214 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 PPP1R3GB7ZBB8 358 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 RBAK-RBAKDNI3L0D1 243 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 K7ENM7 598 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 EIF3DO15371 548 aaKnown RBP eCLIP19.39■□□□□ 0.69
SREBF1-211ENST00000476994 LPXNO60711 386 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 CHRNA1P02708 482 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 SRGAP2CP0DJJ0 459 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 MBTD1Q05BQ5 628 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 TYRO3Q06418 890 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 TFDP1Q14186 410 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 TCTN1Q2MV58 587 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 ZC2HC1CQ53FD0 456 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-211ENST00000476994 ZNF710Q8N1W2 664 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 ZNF507Q8TCN5 953 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 TMEM40Q8WWA1 233 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 PPP1R16BQ96T49 567 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 KCNG1Q9UIX4 513 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 CDY2AQ9Y6F7 541 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 ZMYM2Q9UBW7 1377 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 BRWD1Q9NSI6 2320 aa19.39■□□□□ 0.69
SREBF1-211ENST00000476994 UBE4BO95155 1302 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 ANK1P16157 1881 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 PRCPP42785 496 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 SMTNP53814 917 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 ZNF445P59923 1031 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 CDC42EP1Q00587 391 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 KCNA1Q09470 495 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 TRIP11Q15643 1979 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 PTPROQ16827 1216 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 PHLPP2Q6ZVD8 1323 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 ADSSL1Q8N142 457 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 GUF1Q8N442 669 aaKnown RBP19.38■□□□□ 0.69
SREBF1-211ENST00000476994 HVCN1Q96D96 273 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 CELF4Q9BZC1 486 aaKnown RBP19.38■□□□□ 0.69
SREBF1-211ENST00000476994 GTPBP4Q9BZE4 634 aaKnown RBP19.38■□□□□ 0.69
SREBF1-211ENST00000476994 OSBPL7Q9BZF2 842 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-211ENST00000476994 TMEM134Q9H6X4 195 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 TRPV2Q9Y5S1 764 aa19.38■□□□□ 0.69
SREBF1-211ENST00000476994 DENND3A2RUS2 1198 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 PRPF6O94906 941 aaKnown RBP19.37■□□□□ 0.69
SREBF1-211ENST00000476994 UPP2O95045 317 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 GCNT3O95395 438 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 DARSP14868 501 aaKnown RBP19.37■□□□□ 0.69
SREBF1-211ENST00000476994 HTRA4P83105 476 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-211ENST00000476994 ALCAMQ13740 583 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 STX1AQ16623 288 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 AMHR2Q16671 573 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 L1TD1Q5T7N2 865 aaKnown RBP19.37■□□□□ 0.69
SREBF1-211ENST00000476994 SPRED2Q7Z698 418 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 MAP4K3Q8IVH8 894 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 DEPTORQ8TB45 409 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 NECAB3Q96P71 396 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-211ENST00000476994 MED15Q96RN5 788 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 OSMRQ99650 979 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 C1QTNF1Q9BXJ1 281 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 IFIH1Q9BYX4 1025 aaKnown RBP19.37■□□□□ 0.69
SREBF1-211ENST00000476994 FZD8Q9H461 694 aa19.37■□□□□ 0.69
SREBF1-211ENST00000476994 CITO14578 2027 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 H0YCG3 227 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 COL9A1P20849 921 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 SCP2P22307 547 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms