RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 ZMYND10O75800 440 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 CCNE2O96020 404 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 HNRNPA1P09651 372 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 MYBP10242 640 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 DSG1Q02413 1049 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 RING1Q06587 406 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 UBE2SQ16763 222 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 LIN9Q5TKA1 542 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 SWSAP1Q6NVH7 229 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 CEP68Q76N32 757 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF280BQ86YH2 543 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 SMAP1Q8IYB5 467 aaPredicted RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 GPR65Q8IYL9 337 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 LRRC71Q8N4P6 559 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 LINC01465Q8N7H1 131 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 ST13P5Q8NFI4 369 aaPredicted RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 ZCCHC14Q8WYQ9 949 aaKnown RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 FGF13Q92913 245 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 MAP3K14Q99558 947 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 KXD1Q9BQD3 176 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 ADAM33Q9BZ11 813 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 RSAD1Q9HA92 442 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
PRPF3-205ENST00000476970 MAFBQ9Y5Q3 323 aaPredicted RBP8.3□□□□□ -1.08
PRPF3-205ENST00000476970 TICRRQ7Z2Z1 1910 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 TAF4O00268 1085 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 HIP1O00291 1037 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 NRP1O14786 923 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 TM4SF5O14894 197 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 ECI2O75521 394 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 DDAH1O94760 285 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 FOSP01100 380 aaPredicted RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 PSAPP07602 524 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 SPATA31D3P0C874 917 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 FGFR4P22455 802 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF76P36508 570 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 CXCL12P48061 93 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 RBM25P49756 843 aaKnown RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 GNAQP50148 359 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 PDE1AP54750 535 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 STPG1Q5TH74 334 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 PSAPL1Q6NUJ1 521 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF746Q6NUN9 644 aaPredicted RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 SPATA31D4Q6ZUB0 917 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 CYB5R4Q7L1T6 521 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 NIPA1Q7RTP0 329 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 GRASPQ7Z6J2 395 aaPredicted RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 RALYLQ86SE5 291 aaKnown RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 LONP2Q86WA8 852 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 PALB2Q86YC2 1186 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 MAP4K1Q92918 833 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 RILPL2Q969X0 211 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 LOXL4Q96JB6 756 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 LSM14BQ9BX40 385 aaKnown RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 HEBP1Q9NRV9 189 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 DIAPH3Q9NSV4 1193 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 FNIP2Q9P278 1114 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 NDRG2Q9UN36 371 aaKnown RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 PRG3Q9Y2Y8 225 aaPredicted RBP8.29□□□□□ -1.08
PRPF3-205ENST00000476970 ITPR1Q14643 2758 aa8.29□□□□□ -1.08
PRPF3-205ENST00000476970 SMG1Q96Q15 3661 aaKnown RBP8.28□□□□□ -1.08
PRPF3-205ENST00000476970 DMXL2Q8TDJ6 3036 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 TTLL13PA6NNM8 815 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 MEIS1O00470 390 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 B4GALT3O60512 393 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 DDHD2O94830 711 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF806P0C7X5 589 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 SDSP20132 328 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 ATP4AP20648 1035 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 HOXA9P31269 272 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 OR1G1P47890 313 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 NOVA1P51513 510 aaKnown RBP8.28□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF252P-AS1Q0IIN9 211 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 FOXC1Q12948 553 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 FZD5Q13467 585 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 USP41Q3LFD5 358 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 PPM1LQ5SGD2 360 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 CATSPER4Q7RTX7 472 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 TRMT1LQ7Z2T5 733 aaKnown RBP8.28□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF410Q86VK4 478 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 FAM160A2Q8N612 972 aaPredicted RBP8.28□□□□□ -1.08
PRPF3-205ENST00000476970 ZNF668Q96K58 619 aaPredicted RBP8.28□□□□□ -1.08
PRPF3-205ENST00000476970 UBN1Q9NPG3 1134 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 RXFP3Q9NSD7 469 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 NRBP2Q9NSY0 501 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 TBC1D22BQ9NU19 505 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 MARCH5Q9NX47 278 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 FBXW11Q9UKB1 542 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 KCNH3Q9ULD8 1083 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 PCDHA10Q9Y5I2 948 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 NOTCH4Q99466 2003 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 ADAMTS20P59510 1910 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 COL4A2P08572 1712 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 IGSF10Q6WRI0 2623 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
PRPF3-205ENST00000476970 MEIS3P2A8K0S8 358 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms